Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)
Imported from atlas release summary for Amphicarpaea edgeworthii.
1777
Candidate Protein Records
1419
Pathway-Level Records
3845
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3845
Family-Level Calls
C4H
7.05%
C3'H/CYP98A
6.5%
BAHD
5.05%
T3O
4.24%
CYP76
4.21%
UGT
4.03%
IFS
3.85%
POD
3.8%
Other Families
61.27%
More Families (98)
4CL
141
3.67%
7DLGT
123
3.2%
DWF4/CYP90B1
115
2.99%
UFGT
105
2.73%
F3'H/CYP75B
101
2.63%
F3H
96
2.5%
NMT
89
2.31%
CYP71
69
1.79%
BR6OX2/CYP85A2
63
1.64%
CODM/T6ODM
62
1.61%
SMT1/SMT2/SMT3
62
1.61%
CAS
60
1.56%
STR
57
1.48%
H6H
56
1.46%
COMT
46
1.2%
CYP90D1
45
1.17%
TPS
45
1.17%
LAC
42
1.09%
IFR
39
1.01%
T16H
37
0.96%
SGD
36
0.94%
GES
36
0.94%
CAD
34
0.88%
PYKS
33
0.86%
16OMT
31
0.81%
PMT
28
0.73%
F5H/CYP84A
28
0.73%
IO
27
0.7%
HCT
27
0.7%
CSE
27
0.7%
RAS
25
0.65%
TRI/TRII
24
0.62%
7DLH
23
0.6%
ANS/LDOX
23
0.6%
COR
22
0.57%
G8O/G8H
22
0.57%
F3'5'H/CYP75A
22
0.57%
CCR
21
0.55%
NCS
20
0.52%
GS
20
0.52%
FNS
20
0.52%
PAL
18
0.47%
CYP51G1
18
0.47%
CPD/CYP90A1
18
0.47%
BR6OX1/CYP85A1
17
0.44%
ANR
16
0.42%
SLS
15
0.39%
CHS
15
0.39%
MPO
14
0.36%
8HGO
13
0.34%
TAT
13
0.34%
DFR
12
0.31%
CCoAOMT
11
0.29%
CNMT
10
0.26%
LAMT
9
0.23%
CPR
8
0.21%
SQS/FDFT1
8
0.21%
GGPPS
8
0.21%
CYP80B1
7
0.18%
XMT_MXMT_DXMT
6
0.16%
CYP719
6
0.16%
CHI
6
0.16%
ROT3/CYP90C1
6
0.16%
DET2
6
0.16%
ISY
5
0.13%
FLS
5
0.13%
SQE
5
0.13%
MVD
5
0.13%
MVK
5
0.13%
DXS
5
0.13%
BBE
4
0.1%
HPPR
4
0.1%
SMO1/SMO2
4
0.1%
CMK/IspE
4
0.1%
HMGR
4
0.1%
AACT
4
0.1%
TDC
3
0.08%
TYDC_DDC
3
0.08%
HYD1
3
0.08%
MCT/IspD
3
0.08%
HMGS
3
0.08%
FPPS
3
0.08%
6OMT_4OMT_SOMT
2
0.05%
DWF7
2
0.05%
CPI1
2
0.05%
DXR
2
0.05%
IDI
2
0.05%
HDR/IspH
2
0.05%
CYP80F1
1
0.03%
ADC
1
0.03%
ODC
1
0.03%
DWF5
1
0.03%
DWF1
1
0.03%
FK
1
0.03%
PMK
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
GPPS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 419 | 19 | BAHD (145) | View species results |
| Phenylpropanoid pathway | 304 | 12 | POD (130) | View species results |
| Alkaloid pathway | 292 | 23 | NMT (50) | View species results |
| Flavonoid pathway | 171 | 11 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 127 | 7 | C4H (66) | View species results |
| Steroid pathway | 106 | 12 | CAS (51) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1634 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 246 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| AedgHiC_scaffold_40134550 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_40147750 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_40152140 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_40153040 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_50157520 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_50157530 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_50161280 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_50162920 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_50177100 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_50182340 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_60184590 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_60193710 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_60193730 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_60199230 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_60199700 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_60205030 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_60205040 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_70212940 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_70222150 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_70223240 | Alkaloid | STR | medium | pass |
| AedgHiC_scaffold_80238730 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_80245580 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_80249640 | Alkaloid | STR | low | borderline |
| AedgHiC_scaffold_100042340 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_100052800 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_10020350 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_10027760 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_110056040 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_110057450 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_110065150 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_110065510 | Alkaloid | T16H | low | borderline |
| AedgHiC_scaffold_110068420 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_110069090 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20078050 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20080190 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20084300 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20085640 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20090110 | Alkaloid | T16H | low | borderline |
| AedgHiC_scaffold_20090380 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20090390 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_20093090 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_30105630 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_30121890 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_30128200 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_30128210 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_40145060 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_40145090 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_40147990 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_40150250 | Alkaloid | T16H | medium | borderline |
| AedgHiC_scaffold_40151120 | Alkaloid | T16H | low | borderline |