PlantSME Plant secondary metabolism enzyme database

Amphicarpaea edgeworthii (amphicarpaea_edgeworthii)

Imported from atlas release summary for Amphicarpaea edgeworthii.

1419
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 419 19 BAHD (145) View species results
Phenylpropanoid pathway 304 12 POD (130) View species results
Alkaloid pathway 292 23 NMT (50) View species results
Flavonoid pathway 171 11 UFGT (86) View species results
Rosmarinic acid pathway 127 7 C4H (66) View species results
Steroid pathway 106 12 CAS (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1634 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 246 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
AedgHiC_scaffold_30129280 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_30129330 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40134170 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40139830 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40144410 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40149370 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40149810 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40149830 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40149840 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40149860 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40150140 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40150160 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_40150170 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_40150190 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_50167290 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_50167480 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_50167500 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_50167510 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_50172460 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_50172470 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_50172480 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_50174480 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60183540 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_60184800 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_60184810 Alkaloid 7DLGT high pass
AedgHiC_scaffold_60187580 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_60190140 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60190150 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60202400 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60206930 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60206940 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_60206950 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70212690 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70212710 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70215400 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70215410 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_70215450 Alkaloid 7DLGT high pass
AedgHiC_scaffold_70215460 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70215470 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70216830 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70224180 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70224190 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70226970 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_70229780 Alkaloid 7DLGT high pass
AedgHiC_scaffold_70229790 Alkaloid 7DLGT medium pass
AedgHiC_scaffold_80238840 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_80247630 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_80247650 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_90271200 Alkaloid 7DLGT low borderline
AedgHiC_scaffold_90272340 Alkaloid 7DLGT medium pass