PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

871
Candidate Protein Records
691
Pathway-Level Records
1635
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BAampscaffold_130072330 Rosmarinic Acid PAL high pass
BAampscaffold_20115090 Rosmarinic Acid PAL high pass
BAampscaffold_20118280 Rosmarinic Acid PAL high pass
BAampscaffold_20118320 Rosmarinic Acid PAL high pass
BAampscaffold_40140830 Rosmarinic Acid PAL high pass
BAampscaffold_40145860 Rosmarinic Acid PAL medium pass
BAampscaffold_40145870 Rosmarinic Acid PAL high pass
BAampscaffold_40145890 Rosmarinic Acid PAL high pass
BAampscaffold_60191010 Rosmarinic Acid PAL high pass
BAampscaffold_70218670 Rosmarinic Acid PAL high pass
BAampscaffold_90243510 Rosmarinic Acid PAL high pass
BAampscaffold_90243520 Rosmarinic Acid PAL medium pass
BAampscaffold_90243530 Rosmarinic Acid PAL high pass
BAampscaffold_90243560 Rosmarinic Acid PAL high pass
BAampscaffold_90243580 Rosmarinic Acid PAL high pass
BAampscaffold_10000600 Rosmarinic Acid RAS medium pass
BAampscaffold_100024290 Rosmarinic Acid RAS low borderline
BAampscaffold_10003530 Rosmarinic Acid RAS medium pass
BAampscaffold_110032330 Rosmarinic Acid RAS medium pass
BAampscaffold_110032440 Rosmarinic Acid RAS low borderline
BAampscaffold_130068400 Rosmarinic Acid RAS low borderline
BAampscaffold_30133850 Rosmarinic Acid RAS low borderline
BAampscaffold_40149630 Rosmarinic Acid RAS low borderline
BAampscaffold_40149640 Rosmarinic Acid RAS low borderline
BAampscaffold_60199890 Rosmarinic Acid RAS low borderline
BAampscaffold_70213530 Rosmarinic Acid RAS medium pass
BAampscaffold_70215100 Rosmarinic Acid RAS low borderline
BAampscaffold_80223490 Rosmarinic Acid RAS medium pass
BAampscaffold_100026080 Rosmarinic Acid TAT low borderline
BAampscaffold_120047990 Rosmarinic Acid TAT medium pass
BAampscaffold_130063860 Rosmarinic Acid TAT medium pass
BAampscaffold_130068990 Rosmarinic Acid TAT low borderline
BAampscaffold_90245890 Rosmarinic Acid TAT medium pass
BAampscaffold_10000340 Steroid BR6OX1/CYP85A1 medium borderline
BAampscaffold_100014290 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_110040220 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_130076340 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_30125150 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_30136180 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_70208190 Steroid BR6OX1/CYP85A1 low borderline
BAampscaffold_80231670 Steroid BR6OX1/CYP85A1 medium borderline
BAampscaffold_100010190 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_100025770 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_110036660 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_120049760 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_130064470 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_130064730 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_160087470 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20113000 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20113030 Steroid BR6OX2/CYP85A2 low borderline