PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
BAampscaffold_100010190 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_100025770 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_110036660 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_120049760 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_130064470 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_130064730 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_160087470 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20113000 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20113030 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20113050 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20114560 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20115170 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20116660 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20116980 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_20117340 Steroid BR6OX2/CYP85A2 medium borderline
BAampscaffold_30125910 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_30134640 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_40140690 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_40149780 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_40152860 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_50166970 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_50168840 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_50171570 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_60198730 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_70205500 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_70206260 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_70206580 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_80221640 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_80231190 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_80232150 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_80232270 Steroid BR6OX2/CYP85A2 low borderline
BAampscaffold_90237660 Steroid BR6OX2/CYP85A2 low borderline