PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
BAampscaffold_100017530 Flavonoid IFR low borderline
BAampscaffold_100021910 Flavonoid IFR low borderline
BAampscaffold_100021920 Flavonoid IFR low borderline
BAampscaffold_100022540 Flavonoid IFR low borderline
BAampscaffold_100028980 Flavonoid IFR low borderline
BAampscaffold_100030530 Flavonoid IFR low borderline
BAampscaffold_110034180 Flavonoid IFR low borderline
BAampscaffold_120045980 Flavonoid IFR low borderline
BAampscaffold_120051120 Flavonoid IFR medium pass
BAampscaffold_130067680 Flavonoid IFR low borderline
BAampscaffold_130076540 Flavonoid IFR low borderline
BAampscaffold_20100930 Flavonoid IFR low borderline
BAampscaffold_20115500 Flavonoid IFR low borderline
BAampscaffold_20115800 Flavonoid IFR low borderline
BAampscaffold_20118900 Flavonoid IFR low borderline
BAampscaffold_30121930 Flavonoid IFR low borderline
BAampscaffold_30125420 Flavonoid IFR low borderline
BAampscaffold_40140350 Flavonoid IFR low borderline
BAampscaffold_40141200 Flavonoid IFR low borderline
BAampscaffold_40146340 Flavonoid IFR medium borderline
BAampscaffold_50164940 Flavonoid IFR low borderline
BAampscaffold_50165850 Flavonoid IFR medium pass
BAampscaffold_60178960 Flavonoid IFR high pass
BAampscaffold_60197550 Flavonoid IFR low borderline
BAampscaffold_70208070 Flavonoid IFR low borderline
BAampscaffold_70212800 Flavonoid IFR low borderline
BAampscaffold_70214330 Flavonoid IFR low borderline
BAampscaffold_70216030 Flavonoid IFR low borderline
BAampscaffold_80231750 Flavonoid IFR low borderline
BAampscaffold_80232090 Flavonoid IFR low borderline
BAampscaffold_90235720 Flavonoid IFR low borderline
BAampscaffold_90243160 Flavonoid IFR low borderline
BAampscaffold_90244740 Flavonoid IFR high pass