PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
BAampscaffold_100010970 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_110039950 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_110042880 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120046170 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120046900 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120048320 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120049200 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_120049310 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_120052760 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120052920 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120057840 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120058100 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_130066360 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_20092800 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_20099150 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_20099480 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_20117260 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_30136790 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_40153210 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_50155170 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_50162150 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_50166980 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_60180940 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_60186040 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_70206190 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_70208960 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_70214490 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_80224040 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_80228770 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_80231260 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_80233990 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_90245130 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_90246570 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_90247900 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_90248200 Steroid DWF4/CYP90B1 low borderline