PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
BAampscaffold_110035530 Terpenoid AACT medium borderline
BAampscaffold_20091530 Terpenoid AACT medium borderline
BAampscaffold_20112310 Terpenoid AACT low borderline
BAampscaffold_60182440 Terpenoid AACT medium borderline
BAampscaffold_60183380 Terpenoid AACT medium borderline
BAampscaffold_10000600 Terpenoid BAHD medium pass
BAampscaffold_100012730 Terpenoid BAHD medium pass
BAampscaffold_100012980 Terpenoid BAHD low borderline
BAampscaffold_100022220 Terpenoid BAHD medium pass
BAampscaffold_100022250 Terpenoid BAHD medium pass
BAampscaffold_100027200 Terpenoid BAHD low borderline
BAampscaffold_100028250 Terpenoid BAHD medium pass
BAampscaffold_100028830 Terpenoid BAHD medium pass
BAampscaffold_10003530 Terpenoid BAHD low borderline
BAampscaffold_10003620 Terpenoid BAHD medium pass
BAampscaffold_10004590 Terpenoid BAHD medium pass
BAampscaffold_10005440 Terpenoid BAHD medium pass
BAampscaffold_10006820 Terpenoid BAHD low borderline
BAampscaffold_10006830 Terpenoid BAHD medium pass
BAampscaffold_10009000 Terpenoid BAHD medium pass
BAampscaffold_110032330 Terpenoid BAHD low borderline
BAampscaffold_110032440 Terpenoid BAHD low borderline
BAampscaffold_110033640 Terpenoid BAHD low borderline
BAampscaffold_110036890 Terpenoid BAHD medium pass
BAampscaffold_110038170 Terpenoid BAHD medium pass
BAampscaffold_110043460 Terpenoid BAHD medium pass
BAampscaffold_120051370 Terpenoid BAHD medium pass
BAampscaffold_120059040 Terpenoid BAHD low borderline
BAampscaffold_130066050 Terpenoid BAHD medium pass
BAampscaffold_130068400 Terpenoid BAHD low borderline
BAampscaffold_140079130 Terpenoid BAHD medium pass
BAampscaffold_170088540 Terpenoid BAHD low borderline
BAampscaffold_20093250 Terpenoid BAHD medium pass
BAampscaffold_20093310 Terpenoid BAHD medium pass
BAampscaffold_20094900 Terpenoid BAHD medium pass
BAampscaffold_20095560 Terpenoid BAHD medium pass
BAampscaffold_20102770 Terpenoid BAHD medium pass
BAampscaffold_20104550 Terpenoid BAHD medium pass
BAampscaffold_20108240 Terpenoid BAHD medium pass
BAampscaffold_20108810 Terpenoid BAHD medium pass
BAampscaffold_20114050 Terpenoid BAHD medium pass
BAampscaffold_20114510 Terpenoid BAHD medium pass
BAampscaffold_20115680 Terpenoid BAHD low borderline
BAampscaffold_20116000 Terpenoid BAHD medium pass
BAampscaffold_20116920 Terpenoid BAHD low borderline
BAampscaffold_30130300 Terpenoid BAHD medium pass
BAampscaffold_30133850 Terpenoid BAHD low borderline
BAampscaffold_30133940 Terpenoid BAHD medium pass
BAampscaffold_30134050 Terpenoid BAHD medium pass
BAampscaffold_30134130 Terpenoid BAHD medium pass