PlantSME Plant secondary metabolism enzyme database

Brassica rapa (brassica_rapa)

Imported from atlas release summary for Brassica rapa.

2396
Candidate Protein Records
1938
Pathway-Level Records
4856
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 598 20 BAHD (263) View species results
Alkaloid pathway 432 17 7DLGT (75) View species results
Phenylpropanoid pathway 407 11 POD (183) View species results
Flavonoid pathway 231 11 UFGT (148) View species results
Rosmarinic acid pathway 154 7 C4H (63) View species results
Steroid pathway 116 13 SMT1/SMT2/SMT3 (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1919 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 380 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bra020071.1-P Phenylpropanoid POD medium pass
Bra020072.1-P Phenylpropanoid POD medium pass
Bra020152.1-P Phenylpropanoid POD medium pass
Bra020191.1-P Phenylpropanoid POD medium pass
Bra020370.1-P Phenylpropanoid POD medium pass
Bra020782.1-P Phenylpropanoid POD medium pass
Bra021274.1-P Phenylpropanoid POD medium pass
Bra021456.1-P Phenylpropanoid POD medium pass
Bra021488.1-P Phenylpropanoid POD medium pass
Bra022057.1-P Phenylpropanoid POD medium pass
Bra022090.1-P Phenylpropanoid POD medium pass
Bra022195.1-P Phenylpropanoid POD medium pass
Bra022244.1-P Phenylpropanoid POD medium pass
Bra022567.1-P Phenylpropanoid POD medium pass
Bra022853.1-P Phenylpropanoid POD medium pass
Bra022903.1-P Phenylpropanoid POD medium pass
Bra022918.1-P Phenylpropanoid POD medium pass
Bra023099.1-P Phenylpropanoid POD medium pass
Bra023149.1-P Phenylpropanoid POD medium pass
Bra023172.1-P Phenylpropanoid POD low borderline
Bra023374.1-P Phenylpropanoid POD low borderline
Bra023449.1-P Phenylpropanoid POD medium pass
Bra023509.1-P Phenylpropanoid POD medium pass
Bra023639.1-P Phenylpropanoid POD medium pass
Bra023862.1-P Phenylpropanoid POD medium pass
Bra023954.1-P Phenylpropanoid POD medium pass
Bra023978.1-P Phenylpropanoid POD medium pass
Bra024033.1-P Phenylpropanoid POD medium pass
Bra024102.1-P Phenylpropanoid POD medium pass
Bra024267.1-P Phenylpropanoid POD medium pass
Bra024268.1-P Phenylpropanoid POD medium pass
Bra024269.1-P Phenylpropanoid POD medium pass
Bra024635.1-P Phenylpropanoid POD medium pass
Bra024845.1-P Phenylpropanoid POD medium pass
Bra024972.1-P Phenylpropanoid POD medium pass
Bra025604.1-P Phenylpropanoid POD medium pass
Bra026207.1-P Phenylpropanoid POD medium pass
Bra026433.1-P Phenylpropanoid POD medium pass
Bra026470.1-P Phenylpropanoid POD medium pass
Bra026627.1-P Phenylpropanoid POD medium pass
Bra026822.1-P Phenylpropanoid POD medium pass
Bra026874.1-P Phenylpropanoid POD low borderline
Bra027641.1-P Phenylpropanoid POD low borderline
Bra028285.1-P Phenylpropanoid POD medium pass
Bra028436.1-P Phenylpropanoid POD medium pass
Bra028534.1-P Phenylpropanoid POD medium pass
Bra028761.1-P Phenylpropanoid POD medium pass
Bra029624.1-P Phenylpropanoid POD medium pass
Bra029933.1-P Phenylpropanoid POD medium pass
Bra030241.1-P Phenylpropanoid POD medium pass