PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3857
Candidate Protein Records
3128
Pathway-Level Records
8071
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Protein/Isoform Record Pathway Family Confidence Status Best Target
CAame06G0023710 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame06G0023720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame06G0023730 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame06G0037470 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame06G0037480 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000010 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000020 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000030 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000040 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000050 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000060 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0000070 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0007210 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0015040 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0035960 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
CAame07G0035980 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
CAame07G0037380 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0037390 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame07G0037400 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0006970 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0006980 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0006990 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0007020 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0007030 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0011390 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0011400 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0011410 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0011420 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0011430 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020580 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020590 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020600 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020610 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020640 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020650 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020660 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020670 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0020680 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0033090 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035370 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035380 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035390 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035400 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035410 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0035420 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame08G0037410 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
CAame09G0012990 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame09G0013030 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame10G0015770 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame10G0015780 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR