PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T019768 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T020680 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T022496 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T022497 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T022892 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T022904 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T023048 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T023058 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T023212 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T023764 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T024570 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T027140 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T027850 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T027852 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T029838 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T030160 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T030268 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T031278 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T031313 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T031709 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T032455 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T032639 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T032906 Steroid BR6OX2/CYP85A2 low borderline
catharanthus_roseus_CRO_T033043 Steroid BR6OX2/CYP85A2 low borderline