PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T001761 Alkaloid GS high pass
catharanthus_roseus_CRO_T002810 Alkaloid GS low borderline
catharanthus_roseus_CRO_T002820 Alkaloid GS low borderline
catharanthus_roseus_CRO_T002925 Alkaloid GS high pass
catharanthus_roseus_CRO_T003126 Alkaloid GS high pass
catharanthus_roseus_CRO_T003643 Alkaloid GS high pass
catharanthus_roseus_CRO_T005945 Alkaloid GS medium pass
catharanthus_roseus_CRO_T005995 Alkaloid GS medium pass
catharanthus_roseus_CRO_T006068 Alkaloid GS high pass
catharanthus_roseus_CRO_T006259 Alkaloid GS medium pass
catharanthus_roseus_CRO_T006510 Alkaloid GS medium pass
catharanthus_roseus_CRO_T006840 Alkaloid GS high pass
catharanthus_roseus_CRO_T007183 Alkaloid GS low borderline
catharanthus_roseus_CRO_T008301 Alkaloid GS high pass
catharanthus_roseus_CRO_T008342 Alkaloid GS high pass
catharanthus_roseus_CRO_T010119 Alkaloid GS medium pass
catharanthus_roseus_CRO_T011226 Alkaloid GS high pass
catharanthus_roseus_CRO_T011702 Alkaloid GS high pass
catharanthus_roseus_CRO_T012570 Alkaloid GS low borderline
catharanthus_roseus_CRO_T012941 Alkaloid GS high pass
catharanthus_roseus_CRO_T015591 Alkaloid GS medium pass
catharanthus_roseus_CRO_T015615 Alkaloid GS high pass
catharanthus_roseus_CRO_T016729 Alkaloid GS high pass
catharanthus_roseus_CRO_T016931 Alkaloid GS medium pass
catharanthus_roseus_CRO_T017213 Alkaloid GS high pass
catharanthus_roseus_CRO_T017625 Alkaloid GS medium pass
catharanthus_roseus_CRO_T017994 Alkaloid GS high pass
catharanthus_roseus_CRO_T018422 Alkaloid GS low borderline
catharanthus_roseus_CRO_T018598 Alkaloid GS low borderline
catharanthus_roseus_CRO_T019494 Alkaloid GS high pass
catharanthus_roseus_CRO_T019531 Alkaloid GS low borderline
catharanthus_roseus_CRO_T019532 Alkaloid GS medium pass
catharanthus_roseus_CRO_T020524 Alkaloid GS low borderline
catharanthus_roseus_CRO_T020525 Alkaloid GS low borderline
catharanthus_roseus_CRO_T021541 Alkaloid GS high pass
catharanthus_roseus_CRO_T021691 Alkaloid GS high pass
catharanthus_roseus_CRO_T022431 Alkaloid GS high pass
catharanthus_roseus_CRO_T022770 Alkaloid GS high pass
catharanthus_roseus_CRO_T023176 Alkaloid GS high pass
catharanthus_roseus_CRO_T024340 Alkaloid GS low borderline
catharanthus_roseus_CRO_T024553 Alkaloid GS high pass
catharanthus_roseus_CRO_T025465 Alkaloid GS low borderline
catharanthus_roseus_CRO_T025489 Alkaloid GS high pass
catharanthus_roseus_CRO_T026085 Alkaloid GS low borderline
catharanthus_roseus_CRO_T026235 Alkaloid GS high pass
catharanthus_roseus_CRO_T026837 Alkaloid GS high pass
catharanthus_roseus_CRO_T027079 Alkaloid GS high pass
catharanthus_roseus_CRO_T027234 Alkaloid GS high pass
catharanthus_roseus_CRO_T027235 Alkaloid GS high pass
catharanthus_roseus_CRO_T028940 Alkaloid GS high pass