PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
catharanthus_roseus_CRO_T000610 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T001231 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T002680 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T004276 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T004389 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T004477 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T007085 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T008234 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T008327 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T009738 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T010278 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T010616 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T010976 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T012379 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T012446 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T013274 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T015019 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T015478 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T015909 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T016813 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T018286 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T018312 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T020296 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T021581 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T022069 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T022920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T024917 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T024920 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T025110 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T026648 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T026944 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T027142 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T030516 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T030752 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T030753 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T032068 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T032329 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T032671 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
catharanthus_roseus_CRO_T033321 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T033598 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
catharanthus_roseus_CRO_T033685 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL