PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
catharanthus_roseus_CRO_T000732 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
catharanthus_roseus_CRO_T001727 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
catharanthus_roseus_CRO_T007547 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
catharanthus_roseus_CRO_T008343 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
catharanthus_roseus_CRO_T009836 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
catharanthus_roseus_CRO_T011197 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
catharanthus_roseus_CRO_T011372 Terpenoid TPS medium pass TPS__00034__sp_A0A2K9RFZ7_TPS1_VITAC
catharanthus_roseus_CRO_T011373 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
catharanthus_roseus_CRO_T011470 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
catharanthus_roseus_CRO_T012019 Terpenoid TPS medium pass TPS__00022__sp_A0A1V0QSF9_TS1FN_CANSA
catharanthus_roseus_CRO_T012326 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
catharanthus_roseus_CRO_T012577 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
catharanthus_roseus_CRO_T012578 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
catharanthus_roseus_CRO_T012768 Terpenoid TPS medium pass TPS__00029__sp_A0A1W6QDJ1_CPS4_ISORU
catharanthus_roseus_CRO_T013645 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
catharanthus_roseus_CRO_T015020 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
catharanthus_roseus_CRO_T017106 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
catharanthus_roseus_CRO_T017908 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
catharanthus_roseus_CRO_T019008 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
catharanthus_roseus_CRO_T019845 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
catharanthus_roseus_CRO_T021313 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
catharanthus_roseus_CRO_T022287 Terpenoid TPS medium pass TPS__00148__sp_O64961_TPS9_SOLLC
catharanthus_roseus_CRO_T023892 Terpenoid TPS medium pass TPS__00148__sp_O64961_TPS9_SOLLC
catharanthus_roseus_CRO_T024363 Terpenoid TPS medium pass TPS__00009__sp_A0A1C7AAN2_TPS10_TRIWF
catharanthus_roseus_CRO_T026628 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
catharanthus_roseus_CRO_T026879 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
catharanthus_roseus_CRO_T027491 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
catharanthus_roseus_CRO_T027810 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
catharanthus_roseus_CRO_T029045 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
catharanthus_roseus_CRO_T029524 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
catharanthus_roseus_CRO_T031315 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU