PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T001120 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T001883 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T002866 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T005229 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T005256 Alkaloid G8O/G8H medium pass
catharanthus_roseus_CRO_T006570 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T007705 Alkaloid G8O/G8H medium pass
catharanthus_roseus_CRO_T010789 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T010842 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T011135 Alkaloid G8O/G8H low borderline
catharanthus_roseus_CRO_T013825 Alkaloid G8O/G8H medium pass
catharanthus_roseus_CRO_T014252 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T015163 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T016207 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T016918 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T018214 Alkaloid G8O/G8H low borderline
catharanthus_roseus_CRO_T019290 Alkaloid G8O/G8H low borderline
catharanthus_roseus_CRO_T020994 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T021613 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T023307 Alkaloid G8O/G8H medium pass
catharanthus_roseus_CRO_T024058 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T024935 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T025381 Alkaloid G8O/G8H low borderline
catharanthus_roseus_CRO_T028195 Alkaloid G8O/G8H medium borderline
catharanthus_roseus_CRO_T033043 Alkaloid G8O/G8H medium borderline