PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T001995 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T002992 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T003918 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T004355 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T005256 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T006980 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T007661 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T007790 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T010056 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T010433 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T011168 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T011682 Steroid CYP90D1 medium pass
catharanthus_roseus_CRO_T011688 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T011839 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T012144 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T013902 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T014527 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T015220 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T015390 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T015794 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T016206 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T016208 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T016266 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T019212 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T023044 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T024337 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T024548 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T024571 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T025097 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T025407 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T026877 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T028999 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T031227 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T032390 Steroid CYP90D1 medium borderline
catharanthus_roseus_CRO_T033545 Steroid CYP90D1 low borderline
catharanthus_roseus_CRO_T033732 Steroid CYP90D1 low borderline