PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T001528 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T002169 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T002992 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T003847 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T003918 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T004565 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T004752 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T006321 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T006471 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T006980 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T008627 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T009310 Alkaloid IO medium pass
catharanthus_roseus_CRO_T012973 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T012974 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T013307 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T016266 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T018215 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T019049 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T019653 Alkaloid IO medium pass
catharanthus_roseus_CRO_T021157 Alkaloid IO low borderline
catharanthus_roseus_CRO_T022171 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T023212 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T023862 Alkaloid IO low borderline
catharanthus_roseus_CRO_T024420 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T024571 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T025838 Alkaloid IO low borderline
catharanthus_roseus_CRO_T027939 Alkaloid IO low borderline
catharanthus_roseus_CRO_T030322 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T030487 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T031134 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T032859 Alkaloid IO medium borderline
catharanthus_roseus_CRO_T033732 Alkaloid IO medium borderline