PlantSME Plant secondary metabolism enzyme database

Catharanthus roseus (catharanthus_roseus)

Imported from atlas release summary for Catharanthus roseus.

1387
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 377 21 BAHD (138) View species results
Alkaloid pathway 312 21 7DLGT (59) View species results
Phenylpropanoid pathway 292 12 POD (92) View species results
Flavonoid pathway 190 13 UFGT (133) View species results
Rosmarinic acid pathway 147 7 C4H (60) View species results
Steroid pathway 69 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1413 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 242 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
catharanthus_roseus_CRO_T021352 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T021613 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T022171 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T023156 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T024058 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T024420 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T024556 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T024791 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T025931 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T026131 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T028046 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T028195 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T028862 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T029450 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T030322 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T031032 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T031187 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T031279 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T031281 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T031282 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T032842 Steroid DWF4/CYP90B1 low borderline
catharanthus_roseus_CRO_T033153 Steroid DWF4/CYP90B1 medium borderline
catharanthus_roseus_CRO_T033627 Steroid DWF4/CYP90B1 low borderline