PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2983
Candidate Protein Records
2333
Pathway-Level Records
5625
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csinscaffold003650188690.1 Rosmarinic Acid RAS low borderline
Csinscaffold003770190260.1 Rosmarinic Acid RAS low borderline
Csinscaffold004080193270.1 Rosmarinic Acid RAS low borderline
Csinscaffold006290206480.1 Rosmarinic Acid RAS low borderline
Csinscaffold018490224630.1 Rosmarinic Acid RAS medium pass
Csinscaffold113260251550.1 Rosmarinic Acid RAS medium pass
Csinscaffold114130251770.1 Rosmarinic Acid RAS medium pass
Csinscaffold000020015300.1 Rosmarinic Acid TAT medium pass
Csinscaffold000030017510.1 Rosmarinic Acid TAT medium pass
Csinscaffold000030017520.1 Rosmarinic Acid TAT medium pass
Csinscaffold000030017530.1 Rosmarinic Acid TAT low borderline
Csinscaffold000210075970.1 Rosmarinic Acid TAT low borderline
Csinscaffold000540112420.1 Rosmarinic Acid TAT medium pass
Csinscaffold000580115060.1 Rosmarinic Acid TAT medium pass
Csinscaffold000780127470.1 Rosmarinic Acid TAT medium pass
Csinscaffold000780127480.1 Rosmarinic Acid TAT medium pass
Csinscaffold000800128510.1 Rosmarinic Acid TAT medium pass
Csinscaffold000800128510.2 Rosmarinic Acid TAT medium pass
Csinscaffold000970136520.1 Rosmarinic Acid TAT medium pass
Csinscaffold000970136550.1 Rosmarinic Acid TAT medium pass
Csinscaffold001380150420.1 Rosmarinic Acid TAT low borderline
Csinscaffold001450152310.1 Rosmarinic Acid TAT low borderline
Csinscaffold001530154180.1 Rosmarinic Acid TAT medium pass
Csinscaffold001590155530.1 Rosmarinic Acid TAT medium pass
Csinscaffold001940163590.1 Rosmarinic Acid TAT medium pass
Csinscaffold002130166430.1 Rosmarinic Acid TAT medium pass
Csinscaffold002130166440.1 Rosmarinic Acid TAT medium pass
Csinscaffold002130166460.1 Rosmarinic Acid TAT medium pass
Csinscaffold002130166470.1 Rosmarinic Acid TAT medium pass
Csinscaffold002320169500.1 Rosmarinic Acid TAT medium pass
Csinscaffold002450171720.1 Rosmarinic Acid TAT medium pass
Csinscaffold002450171720.2 Rosmarinic Acid TAT medium pass
Csinscaffold002620174510.1 Rosmarinic Acid TAT medium pass
Csinscaffold003380185200.1 Rosmarinic Acid TAT medium pass
Csinscaffold003780190280.1 Rosmarinic Acid TAT medium pass
Csinscaffold004030192430.1 Rosmarinic Acid TAT low borderline
Csinscaffold005360201860.1 Rosmarinic Acid TAT medium pass
Csinscaffold005360201870.1 Rosmarinic Acid TAT medium pass
Csinscaffold005360201870.2 Rosmarinic Acid TAT medium pass
Csinscaffold005360201880.1 Rosmarinic Acid TAT medium pass
Csinscaffold005360201890.1 Rosmarinic Acid TAT medium pass
Csinscaffold006440207150.1 Rosmarinic Acid TAT low borderline
Csinscaffold007060209280.1 Rosmarinic Acid TAT medium pass
Csinscaffold007940211740.1 Rosmarinic Acid TAT medium pass
Csinscaffold008600213310.1 Rosmarinic Acid TAT medium pass
Csinscaffold009970215890.1 Rosmarinic Acid TAT medium pass
Csinscaffold030400231110.1 Rosmarinic Acid TAT medium pass
Csinscaffold046850236450.1 Rosmarinic Acid TAT medium pass
Csinscaffold046850236450.2 Rosmarinic Acid TAT medium pass
Csinscaffold051510237760.1 Rosmarinic Acid TAT medium pass