PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2983
Candidate Protein Records
2333
Pathway-Level Records
5625
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csinscaffold007960211860.2 Steroid CYP90D1 low borderline
Csinscaffold008510213040.1 Steroid CYP90D1 low borderline
Csinscaffold009450214860.1 Steroid CYP90D1 low borderline
Csinscaffold011560218410.1 Steroid CYP90D1 medium borderline
Csinscaffold014810221850.1 Steroid CYP90D1 low borderline
Csinscaffold016700223400.1 Steroid CYP90D1 low borderline
Csinscaffold036860233630.1 Steroid CYP90D1 low borderline
Csinscaffold046670236370.1 Steroid CYP90D1 low borderline
Csinscaffold086020245940.1 Steroid CYP90D1 low borderline
Csinscaffold000240081670.1 Steroid DET2 low borderline
Csinscaffold006400206940.1 Steroid DET2 medium pass
Csinscaffold001510153210.1 Steroid DWF1 medium pass
Csinscaffold001510153210.2 Steroid DWF1 medium pass
Csinscaffold001510153210.3 Steroid DWF1 medium pass
Csinscaffold000010000440.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000010002030.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.2 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.3 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.5 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.6 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.7 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000010002040.8 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000020009900.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000020011220.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000020012810.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000040027560.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000040027600.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000060033610.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000060033620.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000060033630.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000060035560.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000070038160.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000090044110.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000130056040.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000150060720.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000190072200.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000190072200.2 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000190072200.3 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000190072370.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000200073230.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000200073300.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000210075630.5 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000240081620.2 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000260086430.1 Steroid DWF4/CYP90B1 medium borderline
Csinscaffold000310091880.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000330094030.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000330094340.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000330094450.1 Steroid DWF4/CYP90B1 low borderline
Csinscaffold000360097950.1 Steroid DWF4/CYP90B1 low borderline