PlantSME Plant secondary metabolism enzyme database

Citrus sinensis (citrus_sinensis)

Imported from atlas release summary for Citrus sinensis.

2983
Candidate Protein Records
2333
Pathway-Level Records
5625
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 705 19 BAHD (287) View species results
Alkaloid pathway 549 25 NMT (96) View species results
Phenylpropanoid pathway 468 13 POD (203) View species results
Flavonoid pathway 232 15 UFGT (132) View species results
Rosmarinic acid pathway 191 7 C4H (66) View species results
Steroid pathway 188 14 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1881 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 409 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csinscaffold004040192580.2 Phenylpropanoid C4H/CYP73A medium borderline
Csinscaffold005100200440.1 Phenylpropanoid C4H/CYP73A low borderline
Csinscaffold005940204830.1 Phenylpropanoid C4H/CYP73A low borderline
Csinscaffold018030224230.1 Phenylpropanoid C4H/CYP73A medium borderline
Csinscaffold019960225780.1 Phenylpropanoid C4H/CYP73A low borderline
Csinscaffold066210241330.1 Phenylpropanoid C4H/CYP73A low borderline
Csinscaffold078620244140.1 Phenylpropanoid C4H/CYP73A low borderline
Csinscaffold000010001730.2 Phenylpropanoid CAD medium borderline
Csinscaffold000010001730.3 Phenylpropanoid CAD medium borderline
Csinscaffold000010001730.4 Phenylpropanoid CAD medium borderline
Csinscaffold000020009090.1 Phenylpropanoid CAD medium pass
Csinscaffold000020013300.1 Phenylpropanoid CAD medium borderline
Csinscaffold000020014720.1 Phenylpropanoid CAD medium pass
Csinscaffold000030018910.1 Phenylpropanoid CAD low borderline
Csinscaffold000030018910.2 Phenylpropanoid CAD low borderline
Csinscaffold000030018910.5 Phenylpropanoid CAD low borderline
Csinscaffold000030020940.1 Phenylpropanoid CAD medium borderline
Csinscaffold000030022430.1 Phenylpropanoid CAD low borderline
Csinscaffold000030022440.1 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.1 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.10 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.2 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.3 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.4 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.5 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.6 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.7 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.8 Phenylpropanoid CAD medium borderline
Csinscaffold000030022450.9 Phenylpropanoid CAD medium borderline
Csinscaffold000070038110.1 Phenylpropanoid CAD low borderline
Csinscaffold000070038110.2 Phenylpropanoid CAD low borderline
Csinscaffold000090046860.1 Phenylpropanoid CAD medium pass
Csinscaffold000090046860.2 Phenylpropanoid CAD medium pass
Csinscaffold000120054810.1 Phenylpropanoid CAD low borderline
Csinscaffold000200073290.1 Phenylpropanoid CAD low borderline
Csinscaffold000240081530.1 Phenylpropanoid CAD low borderline
Csinscaffold000240081530.2 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.1 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.10 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.2 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.3 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.4 Phenylpropanoid CAD medium pass
Csinscaffold000290088690.7 Phenylpropanoid CAD low borderline
Csinscaffold000290088690.8 Phenylpropanoid CAD medium pass
Csinscaffold000290088690.9 Phenylpropanoid CAD medium pass
Csinscaffold000520110950.1 Phenylpropanoid CAD low borderline
Csinscaffold000540112500.1 Phenylpropanoid CAD medium borderline
Csinscaffold000540112510.1 Phenylpropanoid CAD medium borderline
Csinscaffold000540112510.2 Phenylpropanoid CAD medium borderline
Csinscaffold000590115540.1 Phenylpropanoid CAD medium pass