PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Cnucscaffold10490013710 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold105280014930 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold105280014940 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold115530027120 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold15070058790 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold15960065200 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold15990065420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold163930067750 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold19480085080 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold215980098460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold215980098470 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold21920100190 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold232420110130 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold2400113350 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold26080122040 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold340150090 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold3710160140 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold3880168000 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold42830178330 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold42830178670 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold43800182810 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold47820193330 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold487130195250 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold7110239370 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold7170241170 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold74970248190 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold7810252860 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold7810252870 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold83840261940 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Cnucscaffold88920267840 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Cnucscaffold922790272440 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL