PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
CnucC694067790004660 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold109870020270 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold109870020280 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold1130023560 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold12380034910 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold12630037260 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold1360045430 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold1360045770 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold1360045780 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold1360046420 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold1360046450 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold1360046460 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold1360046530 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold14920056530 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold17870076650 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold183500079050 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold203310091350 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold224380106010 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Cnucscaffold227890107210 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Cnucscaffold23260110280 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold30920140400 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Cnucscaffold325910145360 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold3490153840 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold43310181190 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold44380186100 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold47580192770 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold49010195760 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold55010207540 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold56280211790 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold56280212030 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold69110235810 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Cnucscaffold76180250520 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Cnucscaffold8330261100 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Cnucscaffold89920268880 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Cnucscaffold9820278750 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH