PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
CnucC696033110007330 Rosmarinic Acid 4CL medium pass
Cnucscaffold10490014680 Rosmarinic Acid 4CL medium pass
Cnucscaffold107080017440 Rosmarinic Acid 4CL low borderline
Cnucscaffold1196620030490 Rosmarinic Acid 4CL low borderline
Cnucscaffold141540051180 Rosmarinic Acid 4CL low borderline
Cnucscaffold142450051810 Rosmarinic Acid 4CL low borderline
Cnucscaffold1470055080 Rosmarinic Acid 4CL medium pass
Cnucscaffold16220066830 Rosmarinic Acid 4CL medium pass
Cnucscaffold173970073620 Rosmarinic Acid 4CL medium pass
Cnucscaffold18080077440 Rosmarinic Acid 4CL low borderline
Cnucscaffold180920077530 Rosmarinic Acid 4CL medium pass
Cnucscaffold1900082630 Rosmarinic Acid 4CL medium pass
Cnucscaffold1900082640 Rosmarinic Acid 4CL medium pass
Cnucscaffold19280084280 Rosmarinic Acid 4CL low borderline
Cnucscaffold193140084550 Rosmarinic Acid 4CL medium pass
Cnucscaffold19430084930 Rosmarinic Acid 4CL medium pass
Cnucscaffold19560085430 Rosmarinic Acid 4CL medium pass
Cnucscaffold202240090520 Rosmarinic Acid 4CL low borderline
Cnucscaffold20790095590 Rosmarinic Acid 4CL low borderline
Cnucscaffold20790095600 Rosmarinic Acid 4CL medium pass
Cnucscaffold2150097670 Rosmarinic Acid 4CL low borderline
Cnucscaffold2210102480 Rosmarinic Acid 4CL low borderline
Cnucscaffold22390104300 Rosmarinic Acid 4CL medium pass
Cnucscaffold234490111060 Rosmarinic Acid 4CL medium pass
Cnucscaffold27380127610 Rosmarinic Acid 4CL medium pass
Cnucscaffold27660128220 Rosmarinic Acid 4CL medium pass
Cnucscaffold285360131420 Rosmarinic Acid 4CL medium pass
Cnucscaffold321790144210 Rosmarinic Acid 4CL medium pass
Cnucscaffold33420148580 Rosmarinic Acid 4CL medium pass
Cnucscaffold36830159220 Rosmarinic Acid 4CL medium pass
Cnucscaffold380163880 Rosmarinic Acid 4CL low borderline
Cnucscaffold38690167540 Rosmarinic Acid 4CL low borderline
Cnucscaffold39650170120 Rosmarinic Acid 4CL medium pass
Cnucscaffold4340181690 Rosmarinic Acid 4CL medium pass
Cnucscaffold44550186490 Rosmarinic Acid 4CL low borderline
Cnucscaffold4650189990 Rosmarinic Acid 4CL low borderline
Cnucscaffold52350200970 Rosmarinic Acid 4CL low borderline
Cnucscaffold5670213080 Rosmarinic Acid 4CL medium pass
Cnucscaffold58660218810 Rosmarinic Acid 4CL medium pass
Cnucscaffold59890221860 Rosmarinic Acid 4CL low borderline
Cnucscaffold64590228570 Rosmarinic Acid 4CL medium pass
Cnucscaffold75740249890 Rosmarinic Acid 4CL medium pass
Cnucscaffold75740249900 Rosmarinic Acid 4CL medium pass
Cnucscaffold75740249910 Rosmarinic Acid 4CL medium pass
Cnucscaffold75740249920 Rosmarinic Acid 4CL medium pass
Cnucscaffold9610276850 Rosmarinic Acid 4CL medium pass
CnucC690574960000970 Rosmarinic Acid C4H medium pass
CnucC692600440002590 Rosmarinic Acid C4H medium pass
CnucC693739650004030 Rosmarinic Acid C4H low borderline
CnucC694063410004640 Rosmarinic Acid C4H low borderline