PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
CnucC690574960000970 Alkaloid T3O medium borderline
CnucC692600440002590 Alkaloid T3O medium borderline
Cnucscaffold103270011620 Alkaloid T3O medium pass
Cnucscaffold103850012430 Alkaloid T3O medium borderline
Cnucscaffold103850012440 Alkaloid T3O low borderline
Cnucscaffold10490013490 Alkaloid T3O medium borderline
Cnucscaffold106940016700 Alkaloid T3O medium borderline
Cnucscaffold110110020640 Alkaloid T3O medium pass
Cnucscaffold1130023890 Alkaloid T3O medium borderline
Cnucscaffold1130023930 Alkaloid T3O medium borderline
Cnucscaffold1130024120 Alkaloid T3O medium borderline
Cnucscaffold116700028110 Alkaloid T3O medium pass
Cnucscaffold116700028130 Alkaloid T3O low borderline
Cnucscaffold120660031640 Alkaloid T3O low borderline
Cnucscaffold1360045040 Alkaloid T3O medium pass
Cnucscaffold1360045320 Alkaloid T3O low borderline
Cnucscaffold13660047720 Alkaloid T3O low borderline
Cnucscaffold138360048470 Alkaloid T3O medium borderline
Cnucscaffold14150051120 Alkaloid T3O medium pass
Cnucscaffold1450053350 Alkaloid T3O medium borderline
Cnucscaffold1450053380 Alkaloid T3O medium borderline
Cnucscaffold1450053410 Alkaloid T3O medium borderline
Cnucscaffold15070058960 Alkaloid T3O medium borderline
Cnucscaffold15070058970 Alkaloid T3O medium borderline
Cnucscaffold1540061260 Alkaloid T3O medium borderline
Cnucscaffold154210061480 Alkaloid T3O medium pass
Cnucscaffold15690062720 Alkaloid T3O medium borderline
Cnucscaffold15690062740 Alkaloid T3O medium borderline
Cnucscaffold15690062770 Alkaloid T3O medium borderline
Cnucscaffold158380063990 Alkaloid T3O low borderline
Cnucscaffold162200066870 Alkaloid T3O medium pass
Cnucscaffold162720067250 Alkaloid T3O low borderline
Cnucscaffold166820069490 Alkaloid T3O medium pass
Cnucscaffold17440074290 Alkaloid T3O low borderline
Cnucscaffold17860076380 Alkaloid T3O medium pass
Cnucscaffold18700080960 Alkaloid T3O medium borderline
Cnucscaffold19650086190 Alkaloid T3O medium pass
Cnucscaffold197940087740 Alkaloid T3O medium borderline
Cnucscaffold219000100170 Alkaloid T3O medium borderline
Cnucscaffold22690107070 Alkaloid T3O medium borderline
Cnucscaffold228990107330 Alkaloid T3O medium borderline
Cnucscaffold23080108330 Alkaloid T3O medium pass
Cnucscaffold23080108360 Alkaloid T3O medium pass
Cnucscaffold23140108880 Alkaloid T3O medium pass
Cnucscaffold24240114300 Alkaloid T3O low borderline
Cnucscaffold24880116550 Alkaloid T3O medium pass
Cnucscaffold24960116970 Alkaloid T3O medium borderline
Cnucscaffold25460119290 Alkaloid T3O low borderline
Cnucscaffold26190122480 Alkaloid T3O medium pass
Cnucscaffold2690125140 Alkaloid T3O low borderline