PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
CnucC696033110007330 Flavonoid 4CL medium pass
Cnucscaffold10490014680 Flavonoid 4CL medium pass
Cnucscaffold107080017440 Flavonoid 4CL low borderline
Cnucscaffold1196620030490 Flavonoid 4CL low borderline
Cnucscaffold141540051180 Flavonoid 4CL low borderline
Cnucscaffold142450051810 Flavonoid 4CL low borderline
Cnucscaffold1470055080 Flavonoid 4CL medium pass
Cnucscaffold16220066830 Flavonoid 4CL medium pass
Cnucscaffold173970073620 Flavonoid 4CL medium pass
Cnucscaffold18080077440 Flavonoid 4CL low borderline
Cnucscaffold180920077530 Flavonoid 4CL medium pass
Cnucscaffold1900082630 Flavonoid 4CL medium pass
Cnucscaffold1900082640 Flavonoid 4CL medium pass
Cnucscaffold19280084280 Flavonoid 4CL low borderline
Cnucscaffold193140084550 Flavonoid 4CL medium pass
Cnucscaffold19430084930 Flavonoid 4CL medium pass
Cnucscaffold19560085430 Flavonoid 4CL medium pass
Cnucscaffold202240090520 Flavonoid 4CL low borderline
Cnucscaffold20790095590 Flavonoid 4CL low borderline
Cnucscaffold20790095600 Flavonoid 4CL medium pass
Cnucscaffold2150097670 Flavonoid 4CL low borderline
Cnucscaffold2210102480 Flavonoid 4CL low borderline
Cnucscaffold22390104300 Flavonoid 4CL medium pass
Cnucscaffold234490111060 Flavonoid 4CL medium pass
Cnucscaffold27380127610 Flavonoid 4CL medium pass
Cnucscaffold27660128220 Flavonoid 4CL medium pass
Cnucscaffold285360131420 Flavonoid 4CL medium pass
Cnucscaffold321790144210 Flavonoid 4CL medium pass
Cnucscaffold33420148580 Flavonoid 4CL medium pass
Cnucscaffold36830159220 Flavonoid 4CL medium pass
Cnucscaffold380163880 Flavonoid 4CL low borderline
Cnucscaffold38690167540 Flavonoid 4CL low borderline
Cnucscaffold39650170120 Flavonoid 4CL medium pass
Cnucscaffold4340181690 Flavonoid 4CL medium pass
Cnucscaffold44550186490 Flavonoid 4CL low borderline
Cnucscaffold4650189990 Flavonoid 4CL low borderline
Cnucscaffold52350200970 Flavonoid 4CL low borderline
Cnucscaffold5670213080 Flavonoid 4CL medium pass
Cnucscaffold58660218810 Flavonoid 4CL medium pass
Cnucscaffold59890221860 Flavonoid 4CL low borderline
Cnucscaffold64590228570 Flavonoid 4CL medium pass
Cnucscaffold75740249890 Flavonoid 4CL medium pass
Cnucscaffold75740249900 Flavonoid 4CL medium pass
Cnucscaffold75740249910 Flavonoid 4CL medium pass
Cnucscaffold75740249920 Flavonoid 4CL medium pass
Cnucscaffold9610276850 Flavonoid 4CL medium pass
Cnucscaffold104600012800 Flavonoid ANR low borderline
Cnucscaffold10490013820 Flavonoid ANR medium borderline
Cnucscaffold122480033710 Flavonoid ANR low borderline
Cnucscaffold12380034970 Flavonoid ANR medium borderline