PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold124560035590 Flavonoid ANR medium borderline
Cnucscaffold136330047540 Flavonoid ANR low borderline
Cnucscaffold16880070600 Flavonoid ANR low borderline
Cnucscaffold21540098310 Flavonoid ANR medium borderline
Cnucscaffold23080108290 Flavonoid ANR medium borderline
Cnucscaffold2690124250 Flavonoid ANR medium borderline
Cnucscaffold2690124260 Flavonoid ANR medium borderline
Cnucscaffold3270145740 Flavonoid ANR low borderline
Cnucscaffold39610169630 Flavonoid ANR medium borderline
Cnucscaffold44380186300 Flavonoid ANR medium borderline
Cnucscaffold4840194650 Flavonoid ANR low borderline
Cnucscaffold59570220390 Flavonoid ANR medium borderline
Cnucscaffold59890221840 Flavonoid ANR medium borderline
Cnucscaffold72060241830 Flavonoid ANR medium borderline
Cnucscaffold7360245260 Flavonoid ANR medium borderline
Cnucscaffold740246030 Flavonoid ANR medium pass
Cnucscaffold886840267600 Flavonoid ANR medium borderline
Cnucscaffold9130271000 Flavonoid ANR medium borderline
Cnucscaffold11010020530 Flavonoid ANS/LDOX low borderline
Cnucscaffold112150022220 Flavonoid ANS/LDOX medium borderline
Cnucscaffold1720190072390 Flavonoid ANS/LDOX medium borderline
Cnucscaffold254060119150 Flavonoid ANS/LDOX low borderline
Cnucscaffold30250137710 Flavonoid ANS/LDOX low borderline
Cnucscaffold32830146510 Flavonoid ANS/LDOX medium borderline
Cnucscaffold37200161020 Flavonoid ANS/LDOX medium borderline
Cnucscaffold54260205900 Flavonoid ANS/LDOX low borderline
Cnucscaffold88020266520 Flavonoid ANS/LDOX medium borderline
Cnucscaffold338370149550 Flavonoid C4H medium pass
Cnucscaffold363820158430 Flavonoid C4H medium borderline
Cnucscaffold38200164900 Flavonoid C4H medium borderline
Cnucscaffold43310181010 Flavonoid C4H low borderline
Cnucscaffold82400260020 Flavonoid C4H medium pass
Cnucscaffold92910272700 Flavonoid C4H medium borderline
Cnucscaffold117540028670 Flavonoid CHI medium pass
Cnucscaffold121840033070 Flavonoid CHI medium pass
Cnucscaffold138950048970 Flavonoid CHI medium pass
Cnucscaffold232420110180 Flavonoid CHI medium pass
Cnucscaffold232420110190 Flavonoid CHI medium pass
Cnucscaffold50940198580 Flavonoid CHI medium pass
Cnucscaffold63580226970 Flavonoid CHI medium pass
Cnucscaffold10630015810 Flavonoid CHS medium pass
Cnucscaffold108360018880 Flavonoid CHS medium pass
Cnucscaffold18680080890 Flavonoid CHS medium pass
Cnucscaffold22390104580 Flavonoid CHS medium pass
Cnucscaffold226360106930 Flavonoid CHS medium pass
Cnucscaffold285790131530 Flavonoid CHS medium pass
Cnucscaffold330040147630 Flavonoid CHS medium pass
Cnucscaffold367320158960 Flavonoid CHS medium pass
Cnucscaffold424730178020 Flavonoid CHS medium pass
Cnucscaffold478270193410 Flavonoid CHS medium pass