PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Cnucscaffold2710126690 Alkaloid T3O low borderline
Cnucscaffold272610127240 Alkaloid T3O low borderline
Cnucscaffold27790128980 Alkaloid T3O medium borderline
Cnucscaffold28870132280 Alkaloid T3O medium borderline
Cnucscaffold289140132380 Alkaloid T3O medium borderline
Cnucscaffold289750132390 Alkaloid T3O medium borderline
Cnucscaffold30830139760 Alkaloid T3O medium pass
Cnucscaffold321670144190 Alkaloid T3O medium borderline
Cnucscaffold321670144200 Alkaloid T3O medium borderline
Cnucscaffold34390151470 Alkaloid T3O medium pass
Cnucscaffold35390155240 Alkaloid T3O medium borderline
Cnucscaffold3540155590 Alkaloid T3O medium pass
Cnucscaffold38610166870 Alkaloid T3O medium borderline
Cnucscaffold38680167060 Alkaloid T3O medium pass
Cnucscaffold38680167120 Alkaloid T3O medium borderline
Cnucscaffold401790171860 Alkaloid T3O medium pass
Cnucscaffold40850172890 Alkaloid T3O medium borderline
Cnucscaffold42100176710 Alkaloid T3O medium borderline
Cnucscaffold42260177140 Alkaloid T3O medium borderline
Cnucscaffold4340181740 Alkaloid T3O medium borderline
Cnucscaffold460188690 Alkaloid T3O medium pass
Cnucscaffold46170189090 Alkaloid T3O medium borderline
Cnucscaffold49100196100 Alkaloid T3O low borderline
Cnucscaffold52460201300 Alkaloid T3O medium borderline
Cnucscaffold52460201310 Alkaloid T3O medium borderline
Cnucscaffold52460201320 Alkaloid T3O medium borderline
Cnucscaffold52460201330 Alkaloid T3O medium borderline
Cnucscaffold52460201350 Alkaloid T3O medium borderline
Cnucscaffold55240208130 Alkaloid T3O medium pass
Cnucscaffold5540208890 Alkaloid T3O low borderline
Cnucscaffold55450210380 Alkaloid T3O medium pass
Cnucscaffold55810210820 Alkaloid T3O medium borderline
Cnucscaffold56750213380 Alkaloid T3O low borderline
Cnucscaffold58620217860 Alkaloid T3O medium borderline
Cnucscaffold590219440 Alkaloid T3O medium pass
Cnucscaffold590219620 Alkaloid T3O medium borderline
Cnucscaffold60620222660 Alkaloid T3O medium borderline
Cnucscaffold66570232580 Alkaloid T3O medium borderline
Cnucscaffold670233300 Alkaloid T3O medium pass
Cnucscaffold7290243850 Alkaloid T3O low borderline
Cnucscaffold7290243860 Alkaloid T3O low borderline
Cnucscaffold740245910 Alkaloid T3O medium borderline
Cnucscaffold740245930 Alkaloid T3O medium borderline
Cnucscaffold760250220 Alkaloid T3O medium borderline
Cnucscaffold76550250630 Alkaloid T3O medium pass
Cnucscaffold7840253220 Alkaloid T3O low borderline
Cnucscaffold78940254030 Alkaloid T3O medium pass
Cnucscaffold80256420 Alkaloid T3O medium borderline
Cnucscaffold80256430 Alkaloid T3O medium borderline
Cnucscaffold80256450 Alkaloid T3O medium borderline