PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
Reset
Gene Pathway Family Confidence Status
Cnucscaffold217860099110 Flavonoid UFGT medium pass
Cnucscaffold21800099380 Flavonoid UFGT medium pass
Cnucscaffold21800099390 Flavonoid UFGT medium pass
Cnucscaffold21800099400 Flavonoid UFGT medium pass
Cnucscaffold21800099420 Flavonoid UFGT medium pass
Cnucscaffold222270103460 Flavonoid UFGT low borderline
Cnucscaffold223380103760 Flavonoid UFGT high pass
Cnucscaffold23040107920 Flavonoid UFGT medium pass
Cnucscaffold23040107930 Flavonoid UFGT high pass
Cnucscaffold23040107950 Flavonoid UFGT high pass
Cnucscaffold24140113900 Flavonoid UFGT high pass
Cnucscaffold24140113920 Flavonoid UFGT high pass
Cnucscaffold248330116410 Flavonoid UFGT medium pass
Cnucscaffold248330116420 Flavonoid UFGT medium pass
Cnucscaffold24940116690 Flavonoid UFGT high pass
Cnucscaffold25360118950 Flavonoid UFGT medium pass
Cnucscaffold2710126510 Flavonoid UFGT medium pass
Cnucscaffold29340133900 Flavonoid UFGT high pass
Cnucscaffold300440136450 Flavonoid UFGT high pass
Cnucscaffold30250138160 Flavonoid UFGT high pass
Cnucscaffold30830139680 Flavonoid UFGT medium pass
Cnucscaffold30830139700 Flavonoid UFGT high pass
Cnucscaffold31620142380 Flavonoid UFGT low borderline
Cnucscaffold320143710 Flavonoid UFGT medium pass
Cnucscaffold3270145880 Flavonoid UFGT low borderline
Cnucscaffold3270145890 Flavonoid UFGT medium pass
Cnucscaffold3270145900 Flavonoid UFGT medium pass
Cnucscaffold3270145910 Flavonoid UFGT high pass
Cnucscaffold3270145940 Flavonoid UFGT high pass
Cnucscaffold3270145960 Flavonoid UFGT high pass
Cnucscaffold32980147540 Flavonoid UFGT high pass
Cnucscaffold36420158470 Flavonoid UFGT medium pass
Cnucscaffold36420158480 Flavonoid UFGT high pass
Cnucscaffold366050158610 Flavonoid UFGT high pass
Cnucscaffold37110160200 Flavonoid UFGT medium pass
Cnucscaffold37110160210 Flavonoid UFGT high pass
Cnucscaffold37690162780 Flavonoid UFGT medium pass
Cnucscaffold37690162800 Flavonoid UFGT high pass
Cnucscaffold37690162820 Flavonoid UFGT high pass
Cnucscaffold38570166150 Flavonoid UFGT medium pass
Cnucscaffold38610166930 Flavonoid UFGT medium pass
Cnucscaffold38610166950 Flavonoid UFGT medium pass
Cnucscaffold38680167340 Flavonoid UFGT high pass
Cnucscaffold38680167350 Flavonoid UFGT high pass
Cnucscaffold38750167850 Flavonoid UFGT medium pass
Cnucscaffold4160175410 Flavonoid UFGT medium pass
Cnucscaffold4340181440 Flavonoid UFGT high pass
Cnucscaffold4340181450 Flavonoid UFGT medium pass
Cnucscaffold4340181470 Flavonoid UFGT high pass
Cnucscaffold4340181480 Flavonoid UFGT medium pass