PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold10490013240 Terpenoid AACT low borderline
Cnucscaffold119320029960 Terpenoid AACT medium borderline
Cnucscaffold142450051840 Terpenoid AACT medium borderline
Cnucscaffold14510053670 Terpenoid AACT medium borderline
Cnucscaffold161760066470 Terpenoid AACT medium borderline
Cnucscaffold27660128260 Terpenoid AACT medium borderline
Cnucscaffold31620142390 Terpenoid AACT medium borderline
Cnucscaffold40850173800 Terpenoid AACT low borderline
Cnucscaffold5960220490 Terpenoid AACT low borderline
CnucC693453570003640 Terpenoid BAHD medium pass
CnucC693714390004000 Terpenoid BAHD medium pass
CnucC694004330004540 Terpenoid BAHD medium pass
Cnucscaffold100970009090 Terpenoid BAHD medium pass
Cnucscaffold100970009100 Terpenoid BAHD low borderline
Cnucscaffold10110009210 Terpenoid BAHD medium pass
Cnucscaffold102900010980 Terpenoid BAHD low borderline
Cnucscaffold102900011000 Terpenoid BAHD medium pass
Cnucscaffold10320011560 Terpenoid BAHD medium pass
Cnucscaffold10490014070 Terpenoid BAHD low borderline
Cnucscaffold10490014100 Terpenoid BAHD medium pass
Cnucscaffold10630016030 Terpenoid BAHD low borderline
Cnucscaffold10630016080 Terpenoid BAHD low borderline
Cnucscaffold106910016620 Terpenoid BAHD medium pass
Cnucscaffold11010020540 Terpenoid BAHD medium pass
Cnucscaffold11010020560 Terpenoid BAHD medium pass
Cnucscaffold111400021410 Terpenoid BAHD medium pass
Cnucscaffold111400021420 Terpenoid BAHD medium pass
Cnucscaffold1130023350 Terpenoid BAHD medium pass
Cnucscaffold11480025670 Terpenoid BAHD medium pass
Cnucscaffold11480026240 Terpenoid BAHD medium pass
Cnucscaffold11480026250 Terpenoid BAHD medium pass
Cnucscaffold116700028090 Terpenoid BAHD medium pass
Cnucscaffold116760028340 Terpenoid BAHD low borderline
Cnucscaffold11840029620 Terpenoid BAHD low borderline
Cnucscaffold11960030400 Terpenoid BAHD medium pass
Cnucscaffold122720034010 Terpenoid BAHD medium pass
Cnucscaffold128330038260 Terpenoid BAHD medium pass
Cnucscaffold12840038320 Terpenoid BAHD medium pass
Cnucscaffold130250040380 Terpenoid BAHD medium pass
Cnucscaffold13200041860 Terpenoid BAHD medium pass
Cnucscaffold13300042660 Terpenoid BAHD low borderline
Cnucscaffold135860044860 Terpenoid BAHD medium pass
Cnucscaffold135860044870 Terpenoid BAHD medium pass
Cnucscaffold1360045290 Terpenoid BAHD medium pass
Cnucscaffold1360046390 Terpenoid BAHD medium pass
Cnucscaffold1360046430 Terpenoid BAHD medium pass
Cnucscaffold138370048590 Terpenoid BAHD medium pass
Cnucscaffold14150050930 Terpenoid BAHD medium pass
Cnucscaffold14250051960 Terpenoid BAHD medium pass
Cnucscaffold14270052170 Terpenoid BAHD medium pass