PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1540
Candidate Protein Records
1334
Pathway-Level Records
3174
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Cnucscaffold99210279570 Flavonoid IFS low borderline
Cnucscaffold99210279580 Flavonoid IFS low borderline
Cnucscaffold14270052250 Flavonoid PAL high pass
Cnucscaffold14270052260 Flavonoid PAL high pass
Cnucscaffold25480120290 Flavonoid PAL high pass
Cnucscaffold25480120300 Flavonoid PAL medium pass
Cnucscaffold55400209320 Flavonoid PAL high pass
Cnucscaffold73610245360 Flavonoid PAL high pass
Cnucscaffold88970268010 Flavonoid PAL high pass
CnucC691634730001630 Flavonoid UFGT high pass
CnucC693388130003520 Flavonoid UFGT high pass
CnucC693421650003580 Flavonoid UFGT medium pass
Cnucscaffold10110009180 Flavonoid UFGT medium pass
Cnucscaffold102940011090 Flavonoid UFGT medium pass
Cnucscaffold10490013730 Flavonoid UFGT low borderline
Cnucscaffold10490014410 Flavonoid UFGT high pass
Cnucscaffold112260022580 Flavonoid UFGT medium pass
Cnucscaffold11510026600 Flavonoid UFGT medium pass
Cnucscaffold115630027550 Flavonoid UFGT medium pass
Cnucscaffold1239250035120 Flavonoid UFGT high pass
Cnucscaffold129160038600 Flavonoid UFGT high pass
Cnucscaffold129550038890 Flavonoid UFGT high pass
Cnucscaffold130210040030 Flavonoid UFGT high pass
Cnucscaffold130210040040 Flavonoid UFGT high pass
Cnucscaffold1360045860 Flavonoid UFGT high pass
Cnucscaffold1360045880 Flavonoid UFGT high pass
Cnucscaffold1360045890 Flavonoid UFGT high pass
Cnucscaffold1360045900 Flavonoid UFGT medium pass
Cnucscaffold136330047570 Flavonoid UFGT medium pass
Cnucscaffold136330047580 Flavonoid UFGT low borderline
Cnucscaffold14150051030 Flavonoid UFGT medium pass
Cnucscaffold14150051050 Flavonoid UFGT high pass
Cnucscaffold14150051070 Flavonoid UFGT medium pass
Cnucscaffold14510053630 Flavonoid UFGT high pass
Cnucscaffold1470055190 Flavonoid UFGT high pass
Cnucscaffold149020056340 Flavonoid UFGT low borderline
Cnucscaffold149020056350 Flavonoid UFGT high pass
Cnucscaffold15240060020 Flavonoid UFGT medium pass
Cnucscaffold15920064440 Flavonoid UFGT high pass
Cnucscaffold15920064450 Flavonoid UFGT high pass
Cnucscaffold15960064590 Flavonoid UFGT medium pass
Cnucscaffold15960064610 Flavonoid UFGT medium pass
Cnucscaffold15960064620 Flavonoid UFGT medium pass
Cnucscaffold15960064630 Flavonoid UFGT medium pass
Cnucscaffold15960065140 Flavonoid UFGT high pass
Cnucscaffold15960065150 Flavonoid UFGT high pass
Cnucscaffold15960065160 Flavonoid UFGT medium pass
Cnucscaffold15960065170 Flavonoid UFGT high pass
Cnucscaffold15960065190 Flavonoid UFGT medium pass
Cnucscaffold19100083140 Flavonoid UFGT medium pass