PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold94910276110 Alkaloid 7DLGT medium pass
CnucC694468380005340 Alkaloid 7DLH medium borderline
Cnucscaffold179710077150 Alkaloid 7DLH medium borderline
Cnucscaffold2690124740 Alkaloid 7DLH low borderline
Cnucscaffold2980135450 Alkaloid 7DLH medium borderline
Cnucscaffold4760192800 Alkaloid 7DLH medium borderline
Cnucscaffold79100254780 Alkaloid 7DLH medium borderline
Cnucscaffold79100254790 Alkaloid 7DLH medium borderline
Cnucscaffold91690271910 Alkaloid 7DLH medium borderline
Cnucscaffold106210015640 Alkaloid 8HGO medium borderline
Cnucscaffold106210015650 Alkaloid 8HGO medium borderline
Cnucscaffold108360019140 Alkaloid 8HGO medium borderline
Cnucscaffold19320084610 Alkaloid 8HGO medium borderline
Cnucscaffold25480119810 Alkaloid 8HGO medium borderline
Cnucscaffold36710158910 Alkaloid 8HGO medium borderline
Cnucscaffold473310192530 Alkaloid 8HGO low borderline
Cnucscaffold51980199950 Alkaloid 8HGO low borderline
Cnucscaffold54300206230 Alkaloid 8HGO medium pass
Cnucscaffold54300206240 Alkaloid 8HGO medium borderline
Cnucscaffold54300206250 Alkaloid 8HGO medium borderline
Cnucscaffold58960219350 Alkaloid 8HGO low borderline
Cnucscaffold700237970 Alkaloid 8HGO medium borderline
Cnucscaffold73580245010 Alkaloid 8HGO medium borderline
Cnucscaffold80256860 Alkaloid 8HGO medium borderline
Cnucscaffold21020096450 Alkaloid ADC medium pass
Cnucscaffold58330217140 Alkaloid ADC medium pass
Cnucscaffold58330217150 Alkaloid ADC medium pass
Cnucscaffold97370278110 Alkaloid ADC medium pass
Cnucscaffold19650085940 Alkaloid BBE medium borderline
Cnucscaffold19650085960 Alkaloid BBE medium borderline
Cnucscaffold21670098690 Alkaloid BBE medium borderline
Cnucscaffold37420162110 Alkaloid BBE medium borderline
Cnucscaffold37420162130 Alkaloid BBE medium borderline
Cnucscaffold37420162140 Alkaloid BBE medium borderline
Cnucscaffold42060176530 Alkaloid BBE medium borderline
Cnucscaffold50320198020 Alkaloid BBE medium borderline
Cnucscaffold50320198030 Alkaloid BBE medium borderline
Cnucscaffold6160224030 Alkaloid BBE medium borderline
CnucC693416850003570 Alkaloid CNMT low borderline
Cnucscaffold148330055980 Alkaloid CNMT low borderline
Cnucscaffold204790091860 Alkaloid CNMT low borderline
Cnucscaffold21010096370 Alkaloid CNMT low borderline
Cnucscaffold25280118480 Alkaloid CNMT low borderline
Cnucscaffold262600122520 Alkaloid CNMT low borderline
Cnucscaffold270750125740 Alkaloid CNMT medium borderline
Cnucscaffold30660139120 Alkaloid CNMT low borderline
Cnucscaffold460188730 Alkaloid CNMT low borderline
Cnucscaffold47010192080 Alkaloid CNMT low borderline
Cnucscaffold55320208370 Alkaloid CNMT low borderline
Cnucscaffold57680216530 Alkaloid CNMT low borderline