PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold276600128290 Steroid DET2 low borderline
Cnucscaffold30160136920 Steroid DET2 low borderline
Cnucscaffold53440203570 Steroid DET2 low borderline
Cnucscaffold85860264180 Steroid DET2 low borderline
Cnucscaffold171230072000 Steroid DWF1 medium pass
Cnucscaffold24170114000 Steroid DWF1 medium pass
Cnucscaffold85490263580 Steroid DWF1 medium pass
Cnucscaffold101250009420 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold101360009650 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold101360009660 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold101360009670 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold103270011620 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold103850012430 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold105680015230 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold106940016700 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold106940016710 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold10810018420 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold1130023400 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold116700028130 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold116700028310 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold120660031640 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold121840033100 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold13930049080 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold13930049090 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold154210061480 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold15690062720 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold15690062730 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold15690062770 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold158380063990 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold160140065940 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold162720067250 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold16640069050 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold17440074290 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold179710077150 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold18700080960 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold199960089200 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold22690107070 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold23080108330 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold23140108880 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold24880116560 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold24880116570 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold25460119290 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold262760122560 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold2710126690 Steroid DWF4/CYP90B1 medium borderline
Cnucscaffold272610127240 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold27490127690 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold27790128980 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold28870132280 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold30830139760 Steroid DWF4/CYP90B1 low borderline
Cnucscaffold30870139940 Steroid DWF4/CYP90B1 low borderline