PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold6050222520 Terpenoid BAHD low borderline
Cnucscaffold62450225120 Terpenoid BAHD medium pass
Cnucscaffold64640228600 Terpenoid BAHD low borderline
Cnucscaffold6550230650 Terpenoid BAHD low borderline
Cnucscaffold66890233020 Terpenoid BAHD medium pass
Cnucscaffold67100233600 Terpenoid BAHD low borderline
Cnucscaffold67100233630 Terpenoid BAHD medium pass
Cnucscaffold68020234780 Terpenoid BAHD medium pass
Cnucscaffold68020234790 Terpenoid BAHD medium pass
Cnucscaffold68020234800 Terpenoid BAHD medium pass
Cnucscaffold6900235660 Terpenoid BAHD medium pass
Cnucscaffold69110235850 Terpenoid BAHD low borderline
Cnucscaffold700238000 Terpenoid BAHD low borderline
Cnucscaffold70180238120 Terpenoid BAHD medium pass
Cnucscaffold70180238130 Terpenoid BAHD medium pass
Cnucscaffold73130244420 Terpenoid BAHD low borderline
Cnucscaffold740245670 Terpenoid BAHD medium pass
Cnucscaffold740246430 Terpenoid BAHD medium pass
Cnucscaffold740246520 Terpenoid BAHD medium pass
Cnucscaffold740246610 Terpenoid BAHD medium pass
Cnucscaffold75010248490 Terpenoid BAHD low borderline
Cnucscaffold75350249320 Terpenoid BAHD medium pass
Cnucscaffold75360249450 Terpenoid BAHD low borderline
Cnucscaffold80210257980 Terpenoid BAHD medium pass
Cnucscaffold80630258270 Terpenoid BAHD medium pass
Cnucscaffold81390258840 Terpenoid BAHD medium pass
Cnucscaffold82740260180 Terpenoid BAHD medium pass
Cnucscaffold82740260190 Terpenoid BAHD medium pass
Cnucscaffold83250260690 Terpenoid BAHD medium pass
Cnucscaffold83660261590 Terpenoid BAHD medium pass
Cnucscaffold86650265240 Terpenoid BAHD low borderline
Cnucscaffold87670266200 Terpenoid BAHD medium pass
Cnucscaffold88430267270 Terpenoid BAHD medium pass
Cnucscaffold8990268800 Terpenoid BAHD low borderline
Cnucscaffold90790269930 Terpenoid BAHD medium pass
Cnucscaffold90790269940 Terpenoid BAHD medium pass
Cnucscaffold94760275890 Terpenoid BAHD medium pass
Cnucscaffold97370278160 Terpenoid BAHD low borderline
Cnucscaffold97370278170 Terpenoid BAHD medium pass
Cnucscaffold980278580 Terpenoid BAHD medium pass
Cnucscaffold98880279210 Terpenoid BAHD low borderline
Cnucscaffold147450055500 Terpenoid CMK/IspE low borderline
Cnucscaffold15770063550 Terpenoid CMK/IspE high pass
Cnucscaffold91010270470 Terpenoid CMK/IspE high pass
Cnucscaffold1130023890 Terpenoid CYP71 medium borderline
Cnucscaffold1130023930 Terpenoid CYP71 medium borderline
Cnucscaffold115540027150 Terpenoid CYP71 medium pass
Cnucscaffold13930049080 Terpenoid CYP71 medium borderline
Cnucscaffold13930049090 Terpenoid CYP71 medium borderline
Cnucscaffold1450053350 Terpenoid CYP71 medium borderline