PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1540
Candidate Protein Records
1334
Pathway-Level Records
3174
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Cnucscaffold75130248620 Rosmarinic Acid HPPR low borderline
Cnucscaffold940274510 Rosmarinic Acid HPPR medium pass
Cnucscaffold14270052250 Rosmarinic Acid PAL high pass
Cnucscaffold14270052260 Rosmarinic Acid PAL high pass
Cnucscaffold25480120290 Rosmarinic Acid PAL high pass
Cnucscaffold25480120300 Rosmarinic Acid PAL medium pass
Cnucscaffold55400209320 Rosmarinic Acid PAL high pass
Cnucscaffold73610245360 Rosmarinic Acid PAL high pass
Cnucscaffold88970268010 Rosmarinic Acid PAL high pass
Cnucscaffold10110009210 Rosmarinic Acid RAS low borderline
Cnucscaffold102900010980 Rosmarinic Acid RAS low borderline
Cnucscaffold102900011000 Rosmarinic Acid RAS low borderline
Cnucscaffold11480025670 Rosmarinic Acid RAS low borderline
Cnucscaffold11480026240 Rosmarinic Acid RAS medium pass
Cnucscaffold11480026250 Rosmarinic Acid RAS medium pass
Cnucscaffold14070050070 Rosmarinic Acid RAS low borderline
Cnucscaffold15960064740 Rosmarinic Acid RAS low borderline
Cnucscaffold19650086750 Rosmarinic Acid RAS low borderline
Cnucscaffold20520092070 Rosmarinic Acid RAS medium pass
Cnucscaffold21800099610 Rosmarinic Acid RAS low borderline
Cnucscaffold26570123200 Rosmarinic Acid RAS low borderline
Cnucscaffold282990130080 Rosmarinic Acid RAS medium pass
Cnucscaffold39590169580 Rosmarinic Acid RAS low borderline
Cnucscaffold498530197610 Rosmarinic Acid RAS low borderline
Cnucscaffold55070207600 Rosmarinic Acid RAS low borderline
Cnucscaffold57230215760 Rosmarinic Acid RAS medium pass
Cnucscaffold58230217030 Rosmarinic Acid RAS low borderline
Cnucscaffold5950219840 Rosmarinic Acid RAS low borderline
Cnucscaffold5950219850 Rosmarinic Acid RAS low borderline
Cnucscaffold5950219860 Rosmarinic Acid RAS low borderline
Cnucscaffold5950219870 Rosmarinic Acid RAS low borderline
Cnucscaffold59810221330 Rosmarinic Acid RAS low borderline
Cnucscaffold6900235660 Rosmarinic Acid RAS medium pass
Cnucscaffold90790269930 Rosmarinic Acid RAS medium pass
Cnucscaffold10490014100 Rosmarinic Acid TAT low borderline
Cnucscaffold1540061210 Rosmarinic Acid TAT medium pass
Cnucscaffold15960064730 Rosmarinic Acid TAT low borderline
Cnucscaffold15960064840 Rosmarinic Acid TAT medium pass
Cnucscaffold31090140660 Rosmarinic Acid TAT low borderline
Cnucscaffold332920147970 Rosmarinic Acid TAT medium pass
Cnucscaffold332920147980 Rosmarinic Acid TAT medium pass
Cnucscaffold33930149750 Rosmarinic Acid TAT low borderline
Cnucscaffold39730170590 Rosmarinic Acid TAT medium pass
Cnucscaffold39730170600 Rosmarinic Acid TAT medium pass
Cnucscaffold39960171180 Rosmarinic Acid TAT medium pass
Cnucscaffold49830197100 Rosmarinic Acid TAT low borderline
Cnucscaffold49830197110 Rosmarinic Acid TAT low borderline
Cnucscaffold71320240440 Rosmarinic Acid TAT medium pass
Cnucscaffold71320240450 Rosmarinic Acid TAT medium pass
CnucC694063410004640 Steroid BR6OX1/CYP85A1 medium borderline