PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1334
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Cnucscaffold18710081460 Flavonoid F3H medium borderline
Cnucscaffold18710081470 Flavonoid F3H medium borderline
Cnucscaffold18710081480 Flavonoid F3H medium borderline
Cnucscaffold19000082740 Flavonoid F3H low borderline
Cnucscaffold19650085790 Flavonoid F3H medium borderline
Cnucscaffold19650085810 Flavonoid F3H medium borderline
Cnucscaffold212290097060 Flavonoid F3H medium borderline
Cnucscaffold21800099300 Flavonoid F3H low borderline
Cnucscaffold22010102020 Flavonoid F3H medium borderline
Cnucscaffold22580106640 Flavonoid F3H low borderline
Cnucscaffold23240109530 Flavonoid F3H medium borderline
Cnucscaffold23240109540 Flavonoid F3H medium borderline
Cnucscaffold25360118960 Flavonoid F3H medium pass
Cnucscaffold25460119400 Flavonoid F3H medium borderline
Cnucscaffold26140122260 Flavonoid F3H medium pass
Cnucscaffold26560123100 Flavonoid F3H medium borderline
Cnucscaffold30250137660 Flavonoid F3H medium borderline
Cnucscaffold30250137700 Flavonoid F3H medium borderline
Cnucscaffold308360139790 Flavonoid F3H medium pass
Cnucscaffold31830142900 Flavonoid F3H medium pass
Cnucscaffold31830143130 Flavonoid F3H medium borderline
Cnucscaffold325520144810 Flavonoid F3H medium borderline
Cnucscaffold32830146520 Flavonoid F3H medium borderline
Cnucscaffold32840146700 Flavonoid F3H low borderline
Cnucscaffold332920147990 Flavonoid F3H medium borderline
Cnucscaffold368820159620 Flavonoid F3H medium borderline
Cnucscaffold37200161090 Flavonoid F3H medium borderline
Cnucscaffold37200161100 Flavonoid F3H medium borderline
Cnucscaffold40850173870 Flavonoid F3H low borderline
Cnucscaffold43310181280 Flavonoid F3H medium borderline
Cnucscaffold49830197580 Flavonoid F3H medium borderline
Cnucscaffold51070198910 Flavonoid F3H medium borderline
Cnucscaffold53150203020 Flavonoid F3H medium pass
Cnucscaffold5410204970 Flavonoid F3H medium borderline
Cnucscaffold5410205050 Flavonoid F3H medium pass
Cnucscaffold5410205060 Flavonoid F3H low borderline
Cnucscaffold5440206380 Flavonoid F3H medium borderline
Cnucscaffold5440206390 Flavonoid F3H medium borderline
Cnucscaffold55240208030 Flavonoid F3H medium borderline
Cnucscaffold5850217550 Flavonoid F3H medium borderline
Cnucscaffold5950220080 Flavonoid F3H medium borderline
Cnucscaffold59880221530 Flavonoid F3H medium borderline
Cnucscaffold62230224540 Flavonoid F3H medium borderline
Cnucscaffold66220232100 Flavonoid F3H medium borderline
Cnucscaffold66890232980 Flavonoid F3H medium borderline
Cnucscaffold730244200 Flavonoid F3H low borderline
Cnucscaffold75350249210 Flavonoid F3H medium borderline
Cnucscaffold79700256140 Flavonoid F3H medium borderline
Cnucscaffold80210258120 Flavonoid F3H medium borderline
Cnucscaffold80210258150 Flavonoid F3H medium pass