PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1540
Candidate Protein Records
1334
Pathway-Level Records
3174
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Cnucscaffold3420150630 Alkaloid G8O/G8H medium borderline
Cnucscaffold4400184660 Alkaloid G8O/G8H medium borderline
Cnucscaffold46070188850 Alkaloid G8O/G8H medium borderline
Cnucscaffold52460201340 Alkaloid G8O/G8H medium borderline
Cnucscaffold5480206930 Alkaloid G8O/G8H low borderline
Cnucscaffold5540208900 Alkaloid G8O/G8H medium borderline
Cnucscaffold55810210810 Alkaloid G8O/G8H medium borderline
Cnucscaffold80256500 Alkaloid G8O/G8H medium pass
Cnucscaffold82400260020 Alkaloid G8O/G8H low borderline
CnucC684853900000120 Alkaloid GES medium pass
Cnucscaffold137090047890 Alkaloid GES medium pass
Cnucscaffold181810078110 Alkaloid GES medium pass
Cnucscaffold294320134220 Alkaloid GES medium pass
Cnucscaffold29570134520 Alkaloid GES medium pass
Cnucscaffold29570134530 Alkaloid GES low borderline
Cnucscaffold29570134540 Alkaloid GES medium pass
Cnucscaffold319150143590 Alkaloid GES medium pass
Cnucscaffold3710160150 Alkaloid GES medium pass
Cnucscaffold3710160160 Alkaloid GES low borderline
Cnucscaffold3710160170 Alkaloid GES medium pass
Cnucscaffold3710160180 Alkaloid GES medium pass
Cnucscaffold41120174500 Alkaloid GES low borderline
Cnucscaffold42380177950 Alkaloid GES low borderline
Cnucscaffold5670212970 Alkaloid GES low borderline
Cnucscaffold5670212980 Alkaloid GES low borderline
Cnucscaffold650830229390 Alkaloid GES medium pass
Cnucscaffold101360009640 Alkaloid GS low borderline
Cnucscaffold121870033160 Alkaloid GS medium pass
Cnucscaffold122810034180 Alkaloid GS high pass
Cnucscaffold17320073340 Alkaloid GS low borderline
Cnucscaffold225250106390 Alkaloid GS high pass
Cnucscaffold22580106570 Alkaloid GS high pass
Cnucscaffold239640113260 Alkaloid GS medium pass
Cnucscaffold251670117820 Alkaloid GS low borderline
Cnucscaffold266700123740 Alkaloid GS medium pass
Cnucscaffold266700123750 Alkaloid GS medium pass
Cnucscaffold27340127470 Alkaloid GS medium pass
Cnucscaffold29960135970 Alkaloid GS low borderline
Cnucscaffold30200137040 Alkaloid GS low borderline
Cnucscaffold30200137100 Alkaloid GS high pass
Cnucscaffold30250137750 Alkaloid GS medium pass
Cnucscaffold35000154010 Alkaloid GS low borderline
Cnucscaffold37690162750 Alkaloid GS high pass
Cnucscaffold41120174460 Alkaloid GS high pass
Cnucscaffold42830178560 Alkaloid GS high pass
Cnucscaffold4310180100 Alkaloid GS low borderline
Cnucscaffold46350189460 Alkaloid GS low borderline
Cnucscaffold55400209330 Alkaloid GS medium pass
Cnucscaffold55420209550 Alkaloid GS low borderline
Cnucscaffold635090226370 Alkaloid GS low borderline