PlantSME Plant secondary metabolism enzyme database

Cocos nucifera (cocos_nucifera)

Imported from atlas release summary for Cocos nucifera.

1540
Candidate Protein Records
1334
Pathway-Level Records
3174
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 374 18 BAHD (143) View species results
Alkaloid pathway 280 20 7DLGT (73) View species results
Phenylpropanoid pathway 277 13 POD (118) View species results
Flavonoid pathway 211 12 UFGT (124) View species results
Rosmarinic acid pathway 122 7 C4H (55) View species results
Steroid pathway 70 10 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1177 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 234 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cnucscaffold43800182810 Phenylpropanoid CSE medium pass
Cnucscaffold47820193330 Phenylpropanoid CSE medium pass
Cnucscaffold487130195250 Phenylpropanoid CSE medium pass
Cnucscaffold7110239370 Phenylpropanoid CSE medium pass
Cnucscaffold7170241170 Phenylpropanoid CSE medium pass
Cnucscaffold74970248190 Phenylpropanoid CSE medium pass
Cnucscaffold7810252860 Phenylpropanoid CSE medium pass
Cnucscaffold7810252870 Phenylpropanoid CSE medium pass
Cnucscaffold83840261940 Phenylpropanoid CSE medium pass
Cnucscaffold88920267840 Phenylpropanoid CSE medium pass
Cnucscaffold922790272440 Phenylpropanoid CSE medium pass
Cnucscaffold10630016040 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold1130023400 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold15070058750 Phenylpropanoid F5H/CYP84A medium pass
Cnucscaffold23080108330 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold23080108360 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold24880116560 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold35390155250 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold42100176710 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold4760192800 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold52460201340 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold55810210810 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold64640228680 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold71510240700 Phenylpropanoid F5H/CYP84A low borderline
Cnucscaffold740245910 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold80256460 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold80256480 Phenylpropanoid F5H/CYP84A medium borderline
Cnucscaffold91570271560 Phenylpropanoid F5H/CYP84A low borderline
Cnucscaffold10110009210 Phenylpropanoid HCT low borderline
Cnucscaffold11480026240 Phenylpropanoid HCT medium pass
Cnucscaffold11480026250 Phenylpropanoid HCT medium pass
Cnucscaffold116700028090 Phenylpropanoid HCT low borderline
Cnucscaffold1540061210 Phenylpropanoid HCT low borderline
Cnucscaffold15960064730 Phenylpropanoid HCT low borderline
Cnucscaffold15960064740 Phenylpropanoid HCT low borderline
Cnucscaffold19100083260 Phenylpropanoid HCT medium pass
Cnucscaffold20520092070 Phenylpropanoid HCT medium pass
Cnucscaffold225850106760 Phenylpropanoid HCT low borderline
Cnucscaffold23080108420 Phenylpropanoid HCT medium pass
Cnucscaffold25240117990 Phenylpropanoid HCT medium pass
Cnucscaffold26570123200 Phenylpropanoid HCT low borderline
Cnucscaffold35330155150 Phenylpropanoid HCT low borderline
Cnucscaffold39590169580 Phenylpropanoid HCT low borderline
Cnucscaffold498530197610 Phenylpropanoid HCT low borderline
Cnucscaffold55070207600 Phenylpropanoid HCT low borderline
Cnucscaffold57230215760 Phenylpropanoid HCT medium pass
Cnucscaffold58230217030 Phenylpropanoid HCT medium pass
Cnucscaffold5950219840 Phenylpropanoid HCT low borderline
Cnucscaffold5950219850 Phenylpropanoid HCT low borderline
Cnucscaffold5950219860 Phenylpropanoid HCT low borderline