PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca36967.1 Alkaloid H6H low borderline
genome_Dca39418.1 Alkaloid H6H medium borderline
genome_Dca40417.1 Alkaloid H6H low borderline
genome_Dca41009.1 Alkaloid H6H medium borderline
genome_Dca41606.1 Alkaloid H6H low borderline
genome_Dca42900.1 Alkaloid H6H medium borderline
genome_Dca43351.1 Alkaloid H6H low borderline
genome_Dca44990.1 Alkaloid H6H low borderline
genome_Dca44991.1 Alkaloid H6H low borderline
genome_Dca4594.1 Alkaloid H6H medium borderline
genome_Dca48999.1 Alkaloid H6H medium borderline
genome_Dca49503.1 Alkaloid H6H low borderline
genome_Dca50414.1 Alkaloid H6H medium pass
genome_Dca50431.1 Alkaloid H6H low borderline
genome_Dca50719.1 Alkaloid H6H medium borderline
genome_Dca51809.1 Alkaloid H6H low borderline
genome_Dca52814.1 Alkaloid H6H medium pass
genome_Dca52815.1 Alkaloid H6H medium pass
genome_Dca52820.1 Alkaloid H6H low borderline
genome_Dca52824.1 Alkaloid H6H low borderline
genome_Dca52825.1 Alkaloid H6H low borderline
genome_Dca52828.1 Alkaloid H6H medium borderline
genome_Dca52834.1 Alkaloid H6H medium borderline
genome_Dca52835.1 Alkaloid H6H medium borderline
genome_Dca52845.1 Alkaloid H6H low borderline
genome_Dca52846.1 Alkaloid H6H low borderline
genome_Dca54328.1 Alkaloid H6H low borderline
genome_Dca56864.1 Alkaloid H6H medium pass
genome_Dca58799.1 Alkaloid H6H medium borderline
genome_Dca59026.1 Alkaloid H6H high pass
genome_Dca61044.1 Alkaloid H6H medium borderline
genome_Dca6315.1 Alkaloid H6H low borderline
genome_Dca7519.1 Alkaloid H6H low borderline
genome_Dca7721.1 Alkaloid H6H medium borderline
genome_Dca7926.1 Alkaloid H6H medium borderline
genome_Dca9894.1 Alkaloid H6H medium pass
genome_Dca12312.1 Alkaloid IO medium borderline
genome_Dca12313.1 Alkaloid IO medium borderline
genome_Dca12315.1 Alkaloid IO medium borderline
genome_Dca12317.1 Alkaloid IO medium borderline
genome_Dca22.1 Alkaloid IO medium borderline
genome_Dca27123.1 Alkaloid IO medium borderline
genome_Dca28758.1 Alkaloid IO low borderline
genome_Dca31587.1 Alkaloid IO low borderline
genome_Dca31838.1 Alkaloid IO medium borderline
genome_Dca4763.1 Alkaloid IO medium borderline
genome_Dca49027.1 Alkaloid IO medium borderline
genome_Dca53925.1 Alkaloid IO medium borderline
genome_Dca54353.1 Alkaloid IO medium borderline
genome_Dca55196.1 Alkaloid IO medium borderline