PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca59965.1 Alkaloid TRI/TRII medium pass
genome_Dca60708.1 Alkaloid TRI/TRII medium pass
genome_Dca6097.1 Alkaloid TRI/TRII low borderline
genome_Dca61902.1 Alkaloid TRI/TRII low borderline
genome_Dca7668.1 Alkaloid TRI/TRII medium pass
genome_Dca7669.1 Alkaloid TRI/TRII medium pass
genome_Dca8174.1 Alkaloid TRI/TRII medium pass
genome_Dca34939.1 Alkaloid TYDC_DDC low borderline
genome_Dca35504.1 Alkaloid TYDC_DDC low borderline
genome_Dca36727.1 Alkaloid TYDC_DDC low borderline
genome_Dca5748.1 Alkaloid TYDC_DDC medium borderline
genome_Dca8165.1 Alkaloid TYDC_DDC medium borderline
genome_Dca8166.1 Alkaloid TYDC_DDC medium borderline
genome_Dca8167.1 Alkaloid TYDC_DDC medium borderline
genome_Dca21014.1 Alkaloid XMT_MXMT_DXMT medium borderline
genome_Dca32977.1 Alkaloid XMT_MXMT_DXMT medium borderline
genome_Dca12992.1 Flavonoid 4CL medium pass
genome_Dca16844.1 Flavonoid 4CL low borderline
genome_Dca17014.1 Flavonoid 4CL medium pass
genome_Dca17118.1 Flavonoid 4CL low borderline
genome_Dca17777.1 Flavonoid 4CL medium pass
genome_Dca18926.1 Flavonoid 4CL medium pass
genome_Dca18927.1 Flavonoid 4CL medium pass
genome_Dca19209.1 Flavonoid 4CL low borderline
genome_Dca19750.1 Flavonoid 4CL medium pass
genome_Dca19752.1 Flavonoid 4CL low borderline
genome_Dca19774.1 Flavonoid 4CL medium pass
genome_Dca2016.1 Flavonoid 4CL medium pass
genome_Dca23834.1 Flavonoid 4CL low borderline
genome_Dca25832.1 Flavonoid 4CL low borderline
genome_Dca27186.1 Flavonoid 4CL medium pass
genome_Dca27443.1 Flavonoid 4CL low borderline
genome_Dca31370.1 Flavonoid 4CL medium pass
genome_Dca33834.1 Flavonoid 4CL medium pass
genome_Dca33875.1 Flavonoid 4CL low borderline
genome_Dca34373.1 Flavonoid 4CL medium pass
genome_Dca37430.1 Flavonoid 4CL low borderline
genome_Dca40389.1 Flavonoid 4CL low borderline
genome_Dca40501.1 Flavonoid 4CL medium pass
genome_Dca41603.1 Flavonoid 4CL low borderline
genome_Dca42406.1 Flavonoid 4CL low borderline
genome_Dca42910.1 Flavonoid 4CL medium pass
genome_Dca44228.1 Flavonoid 4CL medium pass
genome_Dca45294.1 Flavonoid 4CL medium pass
genome_Dca4696.1 Flavonoid 4CL medium pass
genome_Dca47092.1 Flavonoid 4CL medium pass
genome_Dca48568.1 Flavonoid 4CL medium pass
genome_Dca49163.1 Flavonoid 4CL medium pass
genome_Dca49561.1 Flavonoid 4CL low borderline
genome_Dca50808.1 Flavonoid 4CL low borderline