PlantSME Plant secondary metabolism enzyme database

Dianthus caryophyllus (dianthus_caryophyllus)

Imported from atlas release summary for Dianthus caryophyllus.

2090
Candidate Protein Records
1667
Pathway-Level Records
4142
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 483 20 BAHD (183) View species results
Phenylpropanoid pathway 402 12 POD (198) View species results
Alkaloid pathway 339 20 7DLGT (65) View species results
Flavonoid pathway 215 12 UFGT (138) View species results
Rosmarinic acid pathway 134 7 C4H (46) View species results
Steroid pathway 94 11 SMT1/SMT2/SMT3 (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1453 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
genome_Dca29907.1 Terpenoid GGPPS medium borderline
genome_Dca3140.1 Terpenoid GGPPS medium borderline
genome_Dca3830.1 Terpenoid GGPPS medium borderline
genome_Dca45912.1 Terpenoid GGPPS medium borderline
genome_Dca45997.1 Terpenoid GGPPS medium borderline
genome_Dca55715.1 Terpenoid GGPPS medium borderline
genome_Dca26013.1 Terpenoid GPPS medium borderline
genome_Dca3831.1 Terpenoid GPPS medium pass
genome_Dca8905.1 Terpenoid HDR/IspH high pass
genome_Dca61787.1 Terpenoid HDS/IspG medium pass
genome_Dca61788.1 Terpenoid HDS/IspG high pass
genome_Dca13997.1 Terpenoid HMGR medium pass
genome_Dca2794.1 Terpenoid HMGR medium pass
genome_Dca47843.1 Terpenoid HMGR medium pass
genome_Dca59150.1 Terpenoid HMGR medium pass
genome_Dca1754.1 Terpenoid HMGS low borderline
genome_Dca23358.1 Terpenoid HMGS high pass
genome_Dca30728.1 Terpenoid HMGS high pass
genome_Dca38533.1 Terpenoid HMGS medium pass
genome_Dca50610.1 Terpenoid IDI low borderline
genome_Dca51963.1 Terpenoid IDI medium pass
genome_Dca11883.1 Terpenoid MCT/IspD medium pass
genome_Dca49628.1 Terpenoid MCT/IspD high pass
genome_Dca61078.1 Terpenoid MCT/IspD high pass
genome_Dca31702.1 Terpenoid MDS/IspF high pass
genome_Dca27965.1 Terpenoid MVD medium pass
genome_Dca54357.1 Terpenoid MVD medium pass
genome_Dca61336.1 Terpenoid MVD low borderline
genome_Dca25817.1 Terpenoid MVK medium pass
genome_Dca37848.1 Terpenoid MVK low borderline
genome_Dca46617.1 Terpenoid MVK low borderline
genome_Dca57228.1 Terpenoid PMK medium pass
genome_Dca9611.1 Terpenoid PMK low borderline
genome_Dca11693.1 Terpenoid TPS medium pass
genome_Dca15600.1 Terpenoid TPS medium pass
genome_Dca16160.1 Terpenoid TPS medium pass
genome_Dca18653.1 Terpenoid TPS medium pass
genome_Dca18654.1 Terpenoid TPS medium pass
genome_Dca18655.1 Terpenoid TPS medium pass
genome_Dca19517.1 Terpenoid TPS medium pass
genome_Dca19518.1 Terpenoid TPS medium pass
genome_Dca19862.1 Terpenoid TPS medium pass
genome_Dca2301.1 Terpenoid TPS medium pass
genome_Dca23179.1 Terpenoid TPS medium pass
genome_Dca29313.1 Terpenoid TPS medium pass
genome_Dca30863.1 Terpenoid TPS medium pass
genome_Dca32881.1 Terpenoid TPS medium pass
genome_Dca34353.1 Terpenoid TPS low borderline
genome_Dca3608.1 Terpenoid TPS medium pass
genome_Dca3609.1 Terpenoid TPS medium pass