PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomA10G0027510.1 Flavonoid UFGT medium pass
GtomA10G0027520.1 Flavonoid UFGT high pass
GtomA10G0027520.2 Flavonoid UFGT medium pass
GtomA10G0027530.1 Flavonoid UFGT high pass
GtomA10G0027540.1 Flavonoid UFGT medium pass
GtomA10G0027550.1 Flavonoid UFGT high pass
GtomA10G0028600.1 Flavonoid UFGT high pass
GtomA11G0006130.1 Flavonoid UFGT high pass
GtomA11G0006140.1 Flavonoid UFGT medium pass
GtomA11G0008370.1 Flavonoid UFGT medium pass
GtomA11G0008380.1 Flavonoid UFGT medium pass
GtomA11G0010870.1 Flavonoid UFGT medium pass
GtomA11G0014880.1 Flavonoid UFGT medium pass
GtomA11G0015990.1 Flavonoid UFGT low borderline
GtomA11G0023360.1 Flavonoid UFGT medium pass
GtomA11G0024830.1 Flavonoid UFGT medium pass
GtomA11G0032220.1 Flavonoid UFGT low borderline
GtomA11G0038930.1 Flavonoid UFGT medium pass
GtomA12G0001620.1 Flavonoid UFGT high pass
GtomA12G0002430.1 Flavonoid UFGT high pass
GtomA12G0005320.1 Flavonoid UFGT medium pass
GtomA12G0005330.1 Flavonoid UFGT medium pass
GtomA12G0007230.1 Flavonoid UFGT high pass
GtomA12G0007250.1 Flavonoid UFGT medium pass
GtomA12G0007280.1 Flavonoid UFGT medium pass
GtomA12G0012540.1 Flavonoid UFGT low borderline
GtomA12G0012570.1 Flavonoid UFGT low borderline
GtomA12G0012960.1 Flavonoid UFGT medium pass
GtomA12G0018300.1 Flavonoid UFGT medium pass
GtomA12G0020880.1 Flavonoid UFGT medium pass
GtomA12G0020890.1 Flavonoid UFGT medium pass
GtomA12G0023400.1 Flavonoid UFGT medium pass
GtomA12G0028880.1 Flavonoid UFGT high pass
GtomA12G0028890.1 Flavonoid UFGT high pass
GtomA13G0002110.1 Flavonoid UFGT medium pass
GtomA13G0002120.1 Flavonoid UFGT medium pass
GtomA13G0002140.1 Flavonoid UFGT medium pass
GtomA13G0004760.1 Flavonoid UFGT high pass
GtomA13G0004770.1 Flavonoid UFGT medium pass
GtomA13G0004780.1 Flavonoid UFGT medium pass
GtomA13G0007900.1 Flavonoid UFGT medium pass
GtomA13G0007920.1 Flavonoid UFGT medium pass
GtomA13G0007920.2 Flavonoid UFGT medium pass
GtomA13G0007940.1 Flavonoid UFGT medium pass
GtomA13G0009740.1 Flavonoid UFGT medium pass
GtomA13G0018760.1 Flavonoid UFGT high pass
GtomA13G0018770.1 Flavonoid UFGT medium pass
GtomA13G0026780.1 Flavonoid UFGT high pass
GtomA13G0026790.1 Flavonoid UFGT high pass
GtomA13G0027860.1 Flavonoid UFGT medium pass