PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomD05G0032060.1 Phenylpropanoid CSE medium pass
GtomD05G0039200.1 Phenylpropanoid CSE medium pass
GtomD05G0039230.1 Phenylpropanoid CSE medium pass
GtomD05G0039240.1 Phenylpropanoid CSE medium pass
GtomD05G0039260.1 Phenylpropanoid CSE medium pass
GtomD05G0039270.1 Phenylpropanoid CSE medium pass
GtomD05G0039280.1 Phenylpropanoid CSE medium pass
GtomD05G0039290.1 Phenylpropanoid CSE medium pass
GtomD05G0039320.1 Phenylpropanoid CSE medium pass
GtomD05G0039330.1 Phenylpropanoid CSE medium pass
GtomD05G0039340.1 Phenylpropanoid CSE medium pass
GtomD05G0039360.1 Phenylpropanoid CSE medium pass
GtomD05G0039390.1 Phenylpropanoid CSE medium pass
GtomD05G0039420.1 Phenylpropanoid CSE medium pass
GtomD05G0039510.1 Phenylpropanoid CSE medium pass
GtomD06G0002590.1 Phenylpropanoid CSE medium pass
GtomD06G0009690.1 Phenylpropanoid CSE medium pass
GtomD06G0016350.1 Phenylpropanoid CSE medium pass
GtomD06G0017310.1 Phenylpropanoid CSE medium pass
GtomD06G0017390.1 Phenylpropanoid CSE medium pass
GtomD06G0027240.1 Phenylpropanoid CSE medium pass
GtomD07G0002820.1 Phenylpropanoid CSE medium pass
GtomD08G0009350.1 Phenylpropanoid CSE medium pass
GtomD10G0003700.1 Phenylpropanoid CSE medium pass
GtomD10G0003710.1 Phenylpropanoid CSE medium pass
GtomD10G0018390.1 Phenylpropanoid CSE medium pass
GtomD10G0026770.1 Phenylpropanoid CSE medium pass
GtomD11G0013010.1 Phenylpropanoid CSE medium pass
GtomD11G0022510.1 Phenylpropanoid CSE medium pass
GtomD11G0035550.1 Phenylpropanoid CSE medium pass
GtomD11G0035570.1 Phenylpropanoid CSE medium pass
GtomD12G0000250.1 Phenylpropanoid CSE medium pass
GtomD12G0001410.1 Phenylpropanoid CSE medium pass
GtomD12G0008460.1 Phenylpropanoid CSE medium pass
GtomD12G0017650.1 Phenylpropanoid CSE medium pass
GtomD12G0017650.2 Phenylpropanoid CSE medium pass
GtomD12G0022360.1 Phenylpropanoid CSE medium pass
GtomD13G0003400.1 Phenylpropanoid CSE medium pass
GtomD13G0024010.1 Phenylpropanoid CSE medium pass
Gtomscaffold_3870001900.1 Phenylpropanoid CSE medium pass
GtomA01G0010560.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0011180.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0013830.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0019380.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0023140.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA02G0006530.1 Phenylpropanoid F5H/CYP84A low borderline
GtomA02G0006530.2 Phenylpropanoid F5H/CYP84A low borderline
GtomA03G0009700.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0009710.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0018330.1 Phenylpropanoid F5H/CYP84A medium borderline