PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomD09G0023020.1 Alkaloid G8O/G8H low borderline
GtomD10G0022650.1 Alkaloid G8O/G8H medium borderline
GtomD10G0022660.1 Alkaloid G8O/G8H medium borderline
GtomD10G0027540.1 Alkaloid G8O/G8H medium borderline
GtomD11G0000790.1 Alkaloid G8O/G8H medium borderline
GtomD11G0024700.1 Alkaloid G8O/G8H medium borderline
GtomD11G0037850.1 Alkaloid G8O/G8H medium borderline
GtomD11G0037870.1 Alkaloid G8O/G8H medium borderline
Gtomscaffold_4860002310.1 Alkaloid G8O/G8H medium borderline
GtomA01G0008690.1 Alkaloid GES medium pass
GtomA01G0008700.1 Alkaloid GES medium pass
GtomA01G0008710.1 Alkaloid GES medium pass
GtomA01G0011820.1 Alkaloid GES medium pass
GtomA01G0023730.1 Alkaloid GES medium pass
GtomA01G0023730.2 Alkaloid GES medium pass
GtomA01G0023740.1 Alkaloid GES medium pass
GtomA04G0002610.1 Alkaloid GES medium pass
GtomA04G0002990.1 Alkaloid GES medium pass
GtomA04G0002990.2 Alkaloid GES medium pass
GtomA04G0003020.1 Alkaloid GES medium pass
GtomA04G0003030.1 Alkaloid GES medium pass
GtomA04G0003040.1 Alkaloid GES medium pass
GtomA04G0003050.1 Alkaloid GES medium pass
GtomA04G0003060.1 Alkaloid GES medium pass
GtomA04G0003080.1 Alkaloid GES medium pass
GtomA04G0003900.1 Alkaloid GES medium pass
GtomA04G0003910.1 Alkaloid GES medium pass
GtomA04G0006490.1 Alkaloid GES medium pass
GtomA04G0006500.1 Alkaloid GES medium pass
GtomA04G0014250.1 Alkaloid GES medium pass
GtomA05G0008700.1 Alkaloid GES medium pass
GtomA05G0017710.1 Alkaloid GES medium pass
GtomA05G0017720.1 Alkaloid GES medium pass
GtomA05G0032060.1 Alkaloid GES medium pass
GtomA05G0032070.1 Alkaloid GES medium pass
GtomA08G0007980.1 Alkaloid GES low borderline
GtomA09G0000920.1 Alkaloid GES medium pass
GtomA09G0003880.1 Alkaloid GES medium pass
GtomA09G0003880.2 Alkaloid GES medium pass
GtomA09G0003900.1 Alkaloid GES medium pass
GtomA09G0003910.1 Alkaloid GES medium pass
GtomA09G0003910.2 Alkaloid GES medium pass
GtomA10G0000550.1 Alkaloid GES medium pass
GtomA10G0000550.2 Alkaloid GES medium pass
GtomA10G0000550.3 Alkaloid GES low borderline
GtomA10G0000550.4 Alkaloid GES medium pass
GtomA10G0000570.1 Alkaloid GES medium pass
GtomA10G0000580.1 Alkaloid GES medium pass
GtomA10G0001920.1 Alkaloid GES medium pass
GtomA10G0001960.1 Alkaloid GES medium pass