PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomA06G0017090.1 Alkaloid T16H medium pass
GtomA07G0006530.1 Alkaloid T16H medium borderline
GtomA07G0010760.1 Alkaloid T16H medium borderline
GtomA07G0010770.1 Alkaloid T16H medium borderline
GtomA07G0014080.1 Alkaloid T16H medium borderline
GtomA07G0014100.1 Alkaloid T16H medium borderline
GtomA10G0021240.1 Alkaloid T16H medium borderline
GtomA10G0023650.1 Alkaloid T16H medium borderline
GtomA10G0028780.1 Alkaloid T16H medium borderline
GtomA11G0025530.1 Alkaloid T16H medium borderline
GtomA12G0010090.1 Alkaloid T16H medium borderline
GtomA12G0016120.1 Alkaloid T16H medium borderline
GtomA12G0016120.2 Alkaloid T16H medium borderline
GtomA12G0016890.1 Alkaloid T16H medium borderline
GtomA12G0021370.1 Alkaloid T16H medium borderline
GtomA12G0021900.1 Alkaloid T16H medium borderline
GtomA12G0029200.1 Alkaloid T16H medium borderline
GtomA13G0027940.1 Alkaloid T16H medium borderline
GtomD01G0009720.1 Alkaloid T16H medium borderline
GtomD01G0009760.1 Alkaloid T16H medium borderline
GtomD01G0009760.2 Alkaloid T16H medium borderline
GtomD01G0009780.1 Alkaloid T16H medium borderline
GtomD01G0019400.1 Alkaloid T16H medium borderline
GtomD02G0022150.1 Alkaloid T16H medium borderline
GtomD03G0005740.1 Alkaloid T16H medium borderline
GtomD03G0019300.2 Alkaloid T16H medium borderline
GtomD03G0019330.1 Alkaloid T16H medium borderline
GtomD04G0021320.1 Alkaloid T16H low borderline
GtomD05G0014730.1 Alkaloid T16H medium borderline
GtomD05G0021810.1 Alkaloid T16H high pass
GtomD05G0021880.1 Alkaloid T16H medium borderline
GtomD05G0022310.1 Alkaloid T16H medium borderline
GtomD06G0001780.1 Alkaloid T16H medium pass
GtomD06G0001810.1 Alkaloid T16H medium borderline
GtomD06G0001900.1 Alkaloid T16H medium borderline
GtomD07G0010810.1 Alkaloid T16H medium borderline
GtomD07G0010820.1 Alkaloid T16H medium borderline
GtomD08G0016740.1 Alkaloid T16H low borderline
GtomD08G0022090.1 Alkaloid T16H medium borderline
GtomD09G0005870.1 Alkaloid T16H medium borderline
GtomD09G0014670.1 Alkaloid T16H medium borderline
GtomD09G0014680.1 Alkaloid T16H medium borderline
GtomD10G0000680.1 Alkaloid T16H medium borderline
GtomD10G0001630.1 Alkaloid T16H medium borderline
GtomD10G0022410.1 Alkaloid T16H medium borderline
GtomD10G0024500.1 Alkaloid T16H medium borderline
GtomD10G0025020.1 Alkaloid T16H medium borderline
GtomD10G0031440.1 Alkaloid T16H medium borderline
GtomD11G0009310.1 Alkaloid T16H low borderline
GtomD11G0015920.1 Alkaloid T16H medium borderline