PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomD13G0010950.1 Alkaloid T3O medium borderline
GtomD13G0014780.1 Alkaloid T3O medium pass
GtomD13G0014950.1 Alkaloid T3O medium pass
GtomD13G0016610.1 Alkaloid T3O medium borderline
GtomD13G0016760.1 Alkaloid T3O medium borderline
GtomD13G0016790.1 Alkaloid T3O medium borderline
GtomD13G0019490.1 Alkaloid T3O medium pass
GtomD13G0019570.1 Alkaloid T3O medium borderline
GtomD13G0024970.1 Alkaloid T3O medium borderline
GtomA01G0001910.1 Alkaloid TDC medium borderline
GtomA01G0001920.1 Alkaloid TDC medium borderline
GtomA01G0023410.1 Alkaloid TDC low borderline
GtomA05G0026410.1 Alkaloid TDC low borderline
GtomA07G0017770.3 Alkaloid TDC medium borderline
GtomA07G0017770.4 Alkaloid TDC medium borderline
GtomA13G0020000.1 Alkaloid TDC medium borderline
GtomD01G0024300.1 Alkaloid TDC low borderline
GtomD05G0000940.1 Alkaloid TDC low borderline
GtomD05G0026690.1 Alkaloid TDC low borderline
GtomA01G0000820.1 Alkaloid TRI/TRII medium borderline
GtomA01G0000830.1 Alkaloid TRI/TRII low borderline
GtomA01G0000830.2 Alkaloid TRI/TRII low borderline
GtomA01G0017300.1 Alkaloid TRI/TRII medium pass
GtomA01G0023960.1 Alkaloid TRI/TRII medium pass
GtomA01G0023970.1 Alkaloid TRI/TRII medium pass
GtomA01G0023980.1 Alkaloid TRI/TRII medium pass
GtomA01G0024000.1 Alkaloid TRI/TRII medium pass
GtomA01G0024010.1 Alkaloid TRI/TRII medium pass
GtomA01G0024020.1 Alkaloid TRI/TRII medium pass
GtomA01G0024040.1 Alkaloid TRI/TRII medium pass
GtomA01G0024050.1 Alkaloid TRI/TRII medium pass
GtomA01G0024060.1 Alkaloid TRI/TRII medium pass
GtomA01G0027080.1 Alkaloid TRI/TRII medium pass
GtomA04G0007520.1 Alkaloid TRI/TRII low borderline
GtomA04G0011260.1 Alkaloid TRI/TRII low borderline
GtomA04G0011260.2 Alkaloid TRI/TRII low borderline
GtomA05G0010000.1 Alkaloid TRI/TRII medium pass
GtomA05G0010010.1 Alkaloid TRI/TRII medium pass
GtomA05G0011770.1 Alkaloid TRI/TRII medium pass
GtomA05G0018850.1 Alkaloid TRI/TRII medium pass
GtomA05G0034950.1 Alkaloid TRI/TRII medium pass
GtomA05G0039360.1 Alkaloid TRI/TRII medium pass
GtomA07G0007660.1 Alkaloid TRI/TRII medium pass
GtomA07G0015130.1 Alkaloid TRI/TRII medium pass
GtomA07G0016610.1 Alkaloid TRI/TRII low borderline
GtomA07G0016610.2 Alkaloid TRI/TRII low borderline
GtomA07G0026930.1 Alkaloid TRI/TRII medium pass
GtomA08G0008550.1 Alkaloid TRI/TRII medium pass
GtomA08G0024600.1 Alkaloid TRI/TRII medium pass
GtomA09G0004490.1 Alkaloid TRI/TRII medium pass