PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 16OMT
Reset
Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene02104 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene02832 Alkaloid 16OMT low borderline
hippophae_rhamnoides_Hiprha1gene03037 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene04596 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene05874 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene05920 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene06261 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene06802 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene06803 Alkaloid 16OMT medium pass
hippophae_rhamnoides_Hiprha1gene08502 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene10828 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene11381 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene14822 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene14943 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene22192 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene23231 Alkaloid 16OMT medium borderline
hippophae_rhamnoides_Hiprha1gene25237 Alkaloid 16OMT medium borderline