PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
Reset
Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene00894 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene03217 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene03792 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene03793 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene04371 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene04545 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene04673 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene05850 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene06947 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene07550 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene07928 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene08802 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene09504 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene10760 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene12542 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene15431 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene17038 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene17498 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene21480 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene23299 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene24183 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene24723 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene25249 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene26343 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene28597 Alkaloid PYKS high pass
hippophae_rhamnoides_Hiprha1gene28739 Alkaloid PYKS low borderline
hippophae_rhamnoides_Hiprha1gene30592 Alkaloid PYKS high pass