PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene00448 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene00944 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene01091 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene01828 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene03440 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene04179 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05447 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene05555 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05560 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05577 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene05758 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene06055 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene06887 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene07031 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene07375 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene09122 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene09444 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene09802 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene10050 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene12125 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene13070 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene14430 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene16122 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17083 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17482 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17533 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene17667 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17840 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene17965 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene18647 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene20411 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene22113 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene22804 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23082 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23131 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23546 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene23966 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene25834 Phenylpropanoid 4CL medium pass
hippophae_rhamnoides_Hiprha1gene26900 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene26961 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene30629 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene30714 Phenylpropanoid 4CL low borderline
hippophae_rhamnoides_Hiprha1gene00010 Phenylpropanoid C3'H/CYP98A medium borderline
hippophae_rhamnoides_Hiprha1gene00124 Phenylpropanoid C3'H/CYP98A medium borderline
hippophae_rhamnoides_Hiprha1gene00153 Phenylpropanoid C3'H/CYP98A medium borderline
hippophae_rhamnoides_Hiprha1gene00698 Phenylpropanoid C3'H/CYP98A medium borderline
hippophae_rhamnoides_Hiprha1gene01119 Phenylpropanoid C3'H/CYP98A medium borderline
hippophae_rhamnoides_Hiprha1gene01153 Phenylpropanoid C3'H/CYP98A low borderline
hippophae_rhamnoides_Hiprha1gene01298 Phenylpropanoid C3'H/CYP98A low borderline
hippophae_rhamnoides_Hiprha1gene01372 Phenylpropanoid C3'H/CYP98A low borderline