Hippophae rhamnoides (hippophae_rhamnoides)
Imported from atlas release summary for Hippophae rhamnoides.
1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1269
Candidate Genes
BAHD
6.04%
C4H
5.59%
C3'H/CYP98A
5.4%
POD
4.8%
4CL
4.0%
UGT
3.53%
CYP76
3.46%
7DLGT
3.21%
Other Families
63.98%
More Families (96)
F3H
101
3.21%
IFS
101
3.21%
UFGT
96
3.05%
NMT
87
2.76%
T3O
82
2.6%
CODM/T6ODM
67
2.13%
DWF4/CYP90B1
66
2.1%
STR
58
1.84%
H6H
55
1.75%
BR6OX2/CYP85A2
52
1.65%
CAD
50
1.59%
F3'H/CYP75B
49
1.56%
LAC
48
1.52%
SMT1/SMT2/SMT3
42
1.33%
TPS
42
1.33%
TRI/TRII
41
1.3%
CYP71
40
1.27%
IFR
39
1.24%
CSE
39
1.24%
HCT
37
1.18%
CAS
35
1.11%
GES
34
1.08%
7DLH
28
0.89%
PYKS
27
0.86%
F3'5'H/CYP75A
27
0.86%
COMT
27
0.86%
T16H
26
0.83%
CYP90D1
26
0.83%
G8O/G8H
24
0.76%
IO
23
0.73%
PMT
23
0.73%
RAS
23
0.73%
TAT
23
0.73%
GS
21
0.67%
CCR
21
0.67%
ANR
19
0.6%
F5H/CYP84A
19
0.6%
SGD
18
0.57%
16OMT
17
0.54%
FNS
17
0.54%
BBE
16
0.51%
LAMT
15
0.48%
PAL
15
0.48%
CYP51G1
15
0.48%
ANS/LDOX
14
0.44%
CPD/CYP90A1
14
0.44%
BR6OX1/CYP85A1
14
0.44%
NCS
13
0.41%
DFR
13
0.41%
SLS
12
0.38%
CNMT
11
0.35%
ROT3/CYP90C1
10
0.32%
CHS
9
0.29%
CCoAOMT
9
0.29%
8HGO
8
0.25%
MPO
8
0.25%
CPR
8
0.25%
SQE
8
0.25%
DXS
8
0.25%
COR
7
0.22%
ISY
7
0.22%
SQS/FDFT1
7
0.22%
GGPPS
7
0.22%
HPPR
6
0.19%
DET2
6
0.19%
AACT
6
0.19%
CYP80B1
5
0.16%
TYDC_DDC
5
0.16%
HMGR
5
0.16%
FPPS
5
0.16%
MVK
5
0.16%
CYP719
4
0.13%
SMO1/SMO2
4
0.13%
MVD
4
0.13%
PMK
4
0.13%
ADC
3
0.1%
CHI
3
0.1%
DWF7
3
0.1%
HMGS
3
0.1%
6OMT_4OMT_SOMT
2
0.06%
DWF1
2
0.06%
MDS/IspF
2
0.06%
HDS/IspG
2
0.06%
IDI
2
0.06%
CMK/IspE
2
0.06%
MCT/IspD
2
0.06%
HDR/IspH
2
0.06%
XMT_MXMT_DXMT
1
0.03%
ODC
1
0.03%
TDC
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
GPPS
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 373 | 19 | BAHD (149) | View species results |
| Phenylpropanoid pathway | 305 | 12 | POD (142) | View species results |
| Alkaloid pathway | 254 | 20 | NMT (52) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (87) | View species results |
| Rosmarinic acid pathway | 107 | 7 | C4H (40) | View species results |
| Steroid pathway | 75 | 14 | CAS (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1092 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 250 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| hippophae_rhamnoides_Hiprha1gene01194 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| hippophae_rhamnoides_Hiprha1gene05232 | Terpenoid | TPS | medium | pass | TPS__00062__sp_B9T536_TPS10_RICCO |
| hippophae_rhamnoides_Hiprha1gene05237 | Terpenoid | TPS | medium | pass | TPS__00130__sp_J7LQ09_TPS7_PHYDL |
| hippophae_rhamnoides_Hiprha1gene08531 | Terpenoid | TPS | low | borderline | TPS__00015__sp_A0A1L6Z3A5_TPS5_PSEAD |
| hippophae_rhamnoides_Hiprha1gene09857 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| hippophae_rhamnoides_Hiprha1gene11836 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| hippophae_rhamnoides_Hiprha1gene13603 | Terpenoid | TPS | medium | pass | TPS__00168__sp_Q94JS8_FARS_CITJU |
| hippophae_rhamnoides_Hiprha1gene13661 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene13662 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| hippophae_rhamnoides_Hiprha1gene13663 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene13664 | Terpenoid | TPS | medium | pass | TPS__00005__sp_A0A140KFG9_TPS1_CAMBE |
| hippophae_rhamnoides_Hiprha1gene13665 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene13666 | Terpenoid | TPS | medium | pass | TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene13667 | Terpenoid | TPS | medium | pass | TPS__00005__sp_A0A140KFG9_TPS1_CAMBE |
| hippophae_rhamnoides_Hiprha1gene13668 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene13670 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene16527 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| hippophae_rhamnoides_Hiprha1gene17689 | Terpenoid | TPS | medium | pass | TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene17729 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene17730 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene17733 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene17878 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene17942 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene19540 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| hippophae_rhamnoides_Hiprha1gene23168 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| hippophae_rhamnoides_Hiprha1gene24318 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| hippophae_rhamnoides_Hiprha1gene24319 | Terpenoid | TPS | medium | pass | TPS__00059__sp_B9RXW0_TPS7_RICCO |
| hippophae_rhamnoides_Hiprha1gene24560 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene24561 | Terpenoid | TPS | medium | pass | TPS__00136__sp_J9R5V4_TPS2_VALOF |
| hippophae_rhamnoides_Hiprha1gene24562 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene24563 | Terpenoid | TPS | medium | pass | TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene24564 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene24565 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| hippophae_rhamnoides_Hiprha1gene24568 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene24569 | Terpenoid | TPS | medium | pass | TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA |
| hippophae_rhamnoides_Hiprha1gene24571 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene24572 | Terpenoid | TPS | medium | pass | TPS__00114__sp_G5CV45_TPS32_SOLLC |
| hippophae_rhamnoides_Hiprha1gene25164 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| hippophae_rhamnoides_Hiprha1gene25748 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| hippophae_rhamnoides_Hiprha1gene25749 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| hippophae_rhamnoides_Hiprha1gene25783 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| hippophae_rhamnoides_Hiprha1gene28405 | Terpenoid | TPS | medium | pass | TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA |