PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1269
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene00209 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene01123 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene01124 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene01572 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene02414 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene02696 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene02899 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene03707 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene03947 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene03948 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene03978 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene04582 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene04633 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene04634 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene04672 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene04820 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene05518 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene05732 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene05778 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene05922 Flavonoid F3H medium pass
hippophae_rhamnoides_Hiprha1gene05923 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene05983 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene06498 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene06675 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene06855 Flavonoid F3H medium pass
hippophae_rhamnoides_Hiprha1gene08349 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene08636 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene09428 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene09430 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene09431 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene09828 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene10400 Flavonoid F3H medium pass
hippophae_rhamnoides_Hiprha1gene10590 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene12319 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene12760 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene12775 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene13131 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene13352 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene13357 Flavonoid F3H medium pass
hippophae_rhamnoides_Hiprha1gene13521 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene13783 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene13977 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14054 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14158 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14367 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene14468 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14654 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14807 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14923 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene14924 Flavonoid F3H medium borderline